RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 FYNP06241 537 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 CDH5P33151 784 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-227ENST00000591849 NOS2P35228 1153 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 NSFP46459 744 aaKnown RBP10.47□□□□□ -0.73
BRCA1-227ENST00000591849 RING1Q06587 406 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 NNTQ13423 1086 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 E2F5Q15329 346 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 NFKBIBQ15653 356 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 ASIC2Q16515 512 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 HSF5Q4G112 596 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-227ENST00000591849 ZC3H12AQ5D1E8 599 aaKnown RBP10.47□□□□□ -0.73
BRCA1-227ENST00000591849 EMC10Q5UCC4 262 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 PKN3Q6P5Z2 889 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 CEP68Q76N32 757 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 SYT13Q7L8C5 426 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 APTXQ7Z2E3 356 aaKnown RBP10.47□□□□□ -0.73
BRCA1-227ENST00000591849 ETFBKMTQ8IXQ9 262 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 PGBD3Q8N328 593 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 CAMKK1Q8N5S9 505 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 ALLCQ8N6M5 410 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 ZNF513Q8N8E2 541 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-227ENST00000591849 TERB1Q8NA31 727 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 TXNDC5Q8NBS9 432 aaKnown RBP10.47□□□□□ -0.73
BRCA1-227ENST00000591849 ZNF397Q8NF99 534 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-227ENST00000591849 DDX1Q92499 740 aaKnown RBP10.47□□□□□ -0.73
BRCA1-227ENST00000591849 HHIPQ96QV1 700 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 AGPAT1Q99943 283 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 HINFPQ9BQA5 517 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 SLC2A11Q9BYW1 496 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 POLMQ9NP87 494 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-227ENST00000591849 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.47□□□□□ -0.73
BRCA1-227ENST00000591849 RRN3Q9NYV6 651 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 STAP1Q9ULZ2 295 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 DMXL1Q9Y485 3027 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 PATJQ8NI35 1801 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 OBSL1O75147 1896 aa10.47□□□□□ -0.73
BRCA1-227ENST00000591849 OTOGLQ3ZCN5 2332 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 A0A0A0MRY4 1105 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 A0A1B0GTH6 734 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 GOLGA6L7A0A1B0GV03 622 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 PRR23AA6NEV1 266 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 M0QYT0 321 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 TRIM24O15164 1050 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 IRAK2O43187 625 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 TBL1XO60907 577 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 DAB1O75553 588 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 PAPSS2O95340 614 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-227ENST00000591849 APBB3O95704 486 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 PENKP01210 267 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-227ENST00000591849 LMNAP02545 664 aaKnown RBP10.46□□□□□ -0.73
BRCA1-227ENST00000591849 CCR1P32246 355 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 MATKP42679 507 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 WASP42768 502 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 PXNP49023 591 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-227ENST00000591849 SULT1E1P49888 294 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 DGKEP52429 567 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 NOMO3P69849 1222 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 FMO1Q01740 532 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 NR1I3Q14994 352 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 C2CD6Q53TS8 623 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 SFMBT2Q5VUG0 894 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 FYB2Q5VWT5 728 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 RFWD3Q6PCD5 774 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 OLFML1Q6UWY5 402 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 MMS22LQ6ZRQ5 1243 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 PRR23BQ6ZRT6 265 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 SLC26A9Q7LBE3 791 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 PHLDB2Q86SQ0 1253 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 LONP2Q86WA8 852 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 CHSY1Q86X52 802 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 CHPFQ8IZ52 775 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 SLC30A5Q8TAD4 765 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 KCNV2Q8TDN2 545 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 AZIN2Q96A70 460 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 BTN2A3PQ96KV6 586 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 FCRL2Q96LA5 508 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-227ENST00000591849 SLC2A13Q96QE2 648 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 C11orf70Q9BRQ4 267 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 NUP58Q9BVL2 599 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 POLR3BQ9NW08 1133 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-227ENST00000591849 C2orf42Q9NWW7 574 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 BCCIPQ9P287 314 aaKnown RBP eCLIP10.46□□□□□ -0.73
BRCA1-227ENST00000591849 NOCTQ9UK39 431 aaKnown RBP10.46□□□□□ -0.73
BRCA1-227ENST00000591849 MYO6Q9UM54 1294 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 PAXBP1Q9Y5B6 917 aa10.46□□□□□ -0.73
BRCA1-227ENST00000591849 CACNA1IQ9P0X4 2223 aa10.46□□□□□ -0.74
BRCA1-227ENST00000591849 DMDP11532 3685 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 ANKRD62A6NC57 917 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 F5H5T6 163 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 K7ESF4 209 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 AXIN1O15169 862 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 CBFA2T2O43439 604 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 TIMM44O43615 452 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 F9P00740 461 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 IGLV3-27P01718 113 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 CALB1P05937 261 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 CISD3P0C7P0 127 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 DESP17661 470 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 CHRNB2P17787 502 aa10.45□□□□□ -0.74
BRCA1-227ENST00000591849 CNR2P34972 360 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms