RNA–Protein interactions for RNA: ENST00000589934.1

APBA3-204, Transcript of amyloid beta precursor protein binding family A member 3, human

TSL 2

Gene APBA3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBA3-204	ENST00000589934	SMAD4	Q13485	552 aa	Known RBP	13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	CLUL1	Q15846	466 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	ZNF77	Q15935	545 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	LEXM	Q3ZCV2	418 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	BOLA3	Q53S33	107 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	FAM78A	Q5JUQ0	283 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	PIK3R6	Q5UE93	754 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	MANEAL	Q5VSG8	457 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	PAPD7	Q5XG87	772 aa	Known RBP	13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	NADSYN1	Q6IA69	706 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	HTR3D	Q70Z44	454 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	PEX26	Q7Z412	305 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	RHOT1	Q8IXI2	618 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	FAM217A	Q8IXS0	508 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	TSC1	Q92574	1164 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	PLD4	Q96BZ4	506 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	P2RY11	Q96G91	374 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	C1orf74	Q96LT6	269 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	NECTIN4	Q96NY8	510 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	ALS2CR12	Q96Q35	445 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	HAPLN3	Q96S86	360 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	SNRNP25	Q9BV90	132 aa	Known RBP	13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	TKTL2	Q9H0I9	626 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	OSBPL2	Q9H1P3	480 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	WDCP	Q9H6R7	721 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	TDP1	Q9NUW8	608 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	AMFR	Q9UKV5	643 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	CDH7	Q9ULB5	785 aa		13.71	□□□□□ -0.21
APBA3-204	ENST00000589934	SYNJ2BP-COX16	A0A087WUM0	186 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	CCDC66	A2RUB6	948 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	MIF4GD	A9UHW6	222 aa	Known RBP	13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	FAM72C	H0Y354	149 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	LEFTY2	O00292	366 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	ENC1	O14682	589 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	SPOP	O43791	374 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	PAGE1	O75459	146 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	ATP1A1	P05023	1023 aa	Known RBP	13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	SLC2A3	P11169	496 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	L1CAM	P32004	1257 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	MLLT6	P55198	1093 aa	Predicted RBP	13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	NRG1	Q02297	640 aa	Predicted RBP	13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	USP4	Q13107	963 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	DPYSL2	Q16555	572 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	C5orf22	Q49AR2	442 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	FAM133B	Q5BKY9	247 aa	Known RBP	13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	KCNT1	Q5JUK3	1230 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	ERMARD	Q5T6L9	678 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	FAM72A	Q5TYM5	149 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	FAM72D	Q6L9T8	149 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	SCYL2	Q6P3W7	929 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	FAM72B	Q86X60	149 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	KATNAL2	Q8IYT4	538 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	PYROXD2	Q8N2H3	581 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	KIAA1958	Q8N8K9	716 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	RAPGEF5	Q92565	580 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	HLA-C	Q95604	372 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	MYEOV	Q96EZ4	313 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	GPATCH2L	Q9NWQ4	482 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	SMPD4	Q9NXE4	827 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	COX16	Q9P0S2	106 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	AGO1	Q9UL18	857 aa	Known RBP	13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	UNC80	Q8N2C7	3258 aa		13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	HELZ	P42694	1942 aa	Known RBP	13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.7	□□□□□ -0.22
APBA3-204	ENST00000589934	PRPSAP2	O60256	369 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	LATS1	O95835	1130 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	CKM	P06732	381 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	HMBS	P08397	361 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	KRT7	P08729	469 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	CD48	P09326	243 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	LAMP2	P13473	410 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	CORO1A	P31146	461 aa	Known RBP	13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	HADH	Q16836	314 aa	Known RBP	13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	SMTNL2	Q2TAL5	461 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	MS4A13	Q5J8X5	152 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	NUGGC	Q68CJ6	796 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	SYT10	Q6XYQ8	523 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	EP400NL	Q6ZTU2	488 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	GET4	Q7L5D6	327 aa	Predicted RBP	13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	C14orf80	Q86SX3	495 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	UNC45B	Q8IWX7	931 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	SH3RF2	Q8TEC5	729 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	SMARCD2	Q92925	531 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	ACSF2	Q96CM8	615 aa	Predicted RBP	13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	FAF2	Q96CS3	445 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	BTN2A3P	Q96KV6	586 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	C16orf45	Q96MC5	204 aa	Predicted RBP	13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	KCTD15	Q96SI1	283 aa	Predicted RBP	13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	OBP2A	Q9NY56	170 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	EPS15L1	Q9UBC2	864 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	SNX10	Q9Y5X0	201 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	HS3ST4	Q9Y661	456 aa		13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.69	□□□□□ -0.22
APBA3-204	ENST00000589934	IGLV3-10	A0A075B6K4	115 aa		13.68	□□□□□ -0.22
APBA3-204	ENST00000589934	E2F8	A0AVK6	867 aa		13.68	□□□□□ -0.22
APBA3-204	ENST00000589934	ANHX	E9PGG2	379 aa		13.68	□□□□□ -0.22
APBA3-204	ENST00000589934	ACSL4	O60488	711 aa		13.68	□□□□□ -0.22
APBA3-204	ENST00000589934	TUBB4A	P04350	444 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms