RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 ATP6V0D2Q8N8Y2 350 aa19.91■□□□□ 0.78
DDX39A-204ENST00000586558 CENPIQ92674 756 aaPredicted RBP19.91■□□□□ 0.78
DDX39A-204ENST00000586558 SHDQ96IW2 340 aa19.91■□□□□ 0.78
DDX39A-204ENST00000586558 EIF3CQ99613 913 aaKnown RBP19.91■□□□□ 0.78
DDX39A-204ENST00000586558 DDX50Q9BQ39 737 aaKnown RBP19.91■□□□□ 0.78
DDX39A-204ENST00000586558 ARHGEF3Q9NR81 526 aa19.91■□□□□ 0.78
DDX39A-204ENST00000586558 PIGVQ9NUD9 493 aa19.91■□□□□ 0.78
DDX39A-204ENST00000586558 GTSE1Q9NYZ3 720 aa19.91■□□□□ 0.78
DDX39A-204ENST00000586558 SYNJ2BP-COX16A0A087WUM0 186 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 SOWAHDA6NJG2 315 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 KCNU1A8MYU2 1149 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 ACSL4O60488 711 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 NDUFA10O95299 355 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 TFE3P19532 575 aaPredicted RBP19.9■□□□□ 0.78
DDX39A-204ENST00000586558 ATP11AP98196 1134 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 DHCR24Q15392 516 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 MLF2Q15773 248 aaPredicted RBP19.9■□□□□ 0.78
DDX39A-204ENST00000586558 ACBD5Q5T8D3 534 aaPredicted RBP19.9■□□□□ 0.78
DDX39A-204ENST00000586558 TRIM67Q6ZTA4 783 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 RALGPS2Q86X27 583 aaPredicted RBP19.9■□□□□ 0.78
DDX39A-204ENST00000586558 TMEM139Q8IV31 216 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 CCDC112Q8NEF3 446 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 ADAM33Q9BZ11 813 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 SPHK2Q9NRA0 654 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 HEBP1Q9NRV9 189 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 COX16Q9P0S2 106 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 UVRAGQ9P2Y5 699 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 EPN1Q9Y6I3 576 aaPredicted RBP19.9■□□□□ 0.78
DDX39A-204ENST00000586558 PIAS3Q9Y6X2 628 aa19.9■□□□□ 0.78
DDX39A-204ENST00000586558 COL4A2P08572 1712 aa19.89■□□□□ 0.77
DDX39A-204ENST00000586558 LY6G5CQ5SRR4 150 aa19.89■□□□□ 0.77
DDX39A-204ENST00000586558 RHBDF2Q6PJF5 856 aa19.89■□□□□ 0.77
DDX39A-204ENST00000586558 FAM172AQ8WUF8 416 aa19.89■□□□□ 0.77
DDX39A-204ENST00000586558 ARHGEF26Q96DR7 871 aa19.89■□□□□ 0.77
DDX39A-204ENST00000586558 NCAPGQ9BPX3 1015 aa19.89■□□□□ 0.77
DDX39A-204ENST00000586558 NUP85Q9BW27 656 aa19.89■□□□□ 0.77
DDX39A-204ENST00000586558 PACSIN1Q9BY11 444 aa19.89■□□□□ 0.77
DDX39A-204ENST00000586558 WDCPQ9H6R7 721 aa19.89■□□□□ 0.77
DDX39A-204ENST00000586558 MARK1Q9P0L2 795 aa19.89■□□□□ 0.77
DDX39A-204ENST00000586558 CALCOCO1Q9P1Z2 691 aa19.89■□□□□ 0.77
DDX39A-204ENST00000586558 LCMT1Q9UIC8 334 aa19.89■□□□□ 0.77
DDX39A-204ENST00000586558 MAN2B1O00754 1011 aa19.88■□□□□ 0.77
DDX39A-204ENST00000586558 HOXC11O43248 304 aaPredicted RBP19.88■□□□□ 0.77
DDX39A-204ENST00000586558 MOCS2O96007 188 aaPredicted RBP19.88■□□□□ 0.77
DDX39A-204ENST00000586558 ADH5P11766 374 aa19.88■□□□□ 0.77
DDX39A-204ENST00000586558 PSMA2P25787 234 aa19.88■□□□□ 0.77
DDX39A-204ENST00000586558 GAD2Q05329 585 aa19.88■□□□□ 0.77
DDX39A-204ENST00000586558 CDO1Q16878 200 aa19.88■□□□□ 0.77
DDX39A-204ENST00000586558 C15orf59Q2T9L4 293 aaPredicted RBP19.88■□□□□ 0.77
DDX39A-204ENST00000586558 SIX5Q8N196 739 aa19.88■□□□□ 0.77
DDX39A-204ENST00000586558 EXOC4Q96A65 974 aa19.88■□□□□ 0.77
DDX39A-204ENST00000586558 ARHGEF38Q9NXL2 777 aa19.88■□□□□ 0.77
DDX39A-204ENST00000586558 CTTNBP2NLQ9P2B4 639 aa19.88■□□□□ 0.77
DDX39A-204ENST00000586558 CA14Q9ULX7 337 aa19.88■□□□□ 0.77
DDX39A-204ENST00000586558 OTOL1A6NHN0 477 aaPredicted RBP19.87■□□□□ 0.77
DDX39A-204ENST00000586558 SPECC1L-ADORA2AF8WAN1 911 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 GFRA2O00451 464 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 CCP110O43303 1012 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 CYBBP04839 570 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 CTHP32929 405 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 GJA4P35212 333 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 MAGEA1P43355 309 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 HDAC4P56524 1084 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 OGDHQ02218 1023 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 ACAP1Q15027 740 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 ARL13BQ3SXY8 428 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 FAM133BQ5BKY9 247 aaKnown RBP19.87■□□□□ 0.77
DDX39A-204ENST00000586558 RAD9BQ6WBX8 426 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 TPRG1Q6ZUI0 275 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 TMEM25Q86YD3 366 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 RHOT2Q8IXI1 618 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 ZNF564Q8TBZ8 553 aaPredicted RBP19.87■□□□□ 0.77
DDX39A-204ENST00000586558 RFFLQ8WZ73 363 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 ANAPC7Q9UJX3 599 aa19.87■□□□□ 0.77
DDX39A-204ENST00000586558 KRBA1A5PL33 1030 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 NRDCO43847 1150 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 RNF8O76064 485 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 EIF2DP41214 584 aaKnown RBP19.86■□□□□ 0.77
DDX39A-204ENST00000586558 STARD6P59095 220 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 PIGHQ14442 188 aaPredicted RBP19.86■□□□□ 0.77
DDX39A-204ENST00000586558 TCEAL1Q15170 157 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 MPPE1Q53F39 396 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 SH3PXD2AQ5TCZ1 1133 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 NADSYN1Q6IA69 706 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 ZNF852Q6ZMS4 543 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 FAM131BQ86XD5 332 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 TTC8Q8TAM2 541 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 NTAN1Q96AB6 310 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 BBS2Q9BXC9 721 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 TRIM7Q9C029 511 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 TKTL2Q9H0I9 626 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 IP6K2Q9UHH9 426 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 MRPS17Q9Y2R5 130 aaKnown RBP19.86■□□□□ 0.77
DDX39A-204ENST00000586558 PCDHA13Q9Y5I0 950 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 TICRRQ7Z2Z1 1910 aa19.86■□□□□ 0.77
DDX39A-204ENST00000586558 MYO1FO00160 1098 aa19.85■□□□□ 0.77
DDX39A-204ENST00000586558 PAGE1O75459 146 aa19.85■□□□□ 0.77
DDX39A-204ENST00000586558 MTA2O94776 668 aa19.85■□□□□ 0.77
DDX39A-204ENST00000586558 PENKP01210 267 aaPredicted RBP19.85■□□□□ 0.77
DDX39A-204ENST00000586558 SOX9P48436 509 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms