RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 NPR3P17342 541 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 ERCC2P18074 760 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 TGM2P21980 687 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 SOX11P35716 441 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 ACADSBP45954 432 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 ATN1P54259 1190 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-217ENST00000584582 THOC5Q13769 683 aaKnown RBP11.65□□□□□ -0.54
TOP3A-217ENST00000584582 PDK1Q15118 436 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 OTOAQ7RTW8 1153 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 ECHDC2Q86YB7 292 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 THEM5Q8N1Q8 247 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 RFWD2Q8NHY2 731 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 CCT6BQ92526 530 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 MCRS1Q96EZ8 462 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 KCTD15Q96SI1 283 aaPredicted RBP11.65□□□□□ -0.54
TOP3A-217ENST00000584582 RABGEF1Q9UJ41 708 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 PACSIN3Q9UKS6 424 aa11.65□□□□□ -0.54
TOP3A-217ENST00000584582 CLUHO75153 1309 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 DNAJC25-GNG10A0A024R161 153 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 ADCY6O43306 1168 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 CIB2O75838 187 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 DGKIO75912 1065 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 KRT16P08779 473 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 TKTP29401 623 aaKnown RBP11.64□□□□□ -0.55
TOP3A-217ENST00000584582 HOXA11P31270 313 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-217ENST00000584582 GARSP41250 739 aaKnown RBP11.64□□□□□ -0.55
TOP3A-217ENST00000584582 AQP5P55064 265 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 FAM110CQ1W6H9 321 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 MGAT5BQ3V5L5 792 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 MFSD5Q6N075 450 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 KIAA1841Q6NSI8 718 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 RHBDF2Q6PJF5 856 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 P2RY11Q96G91 374 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 SERAC1Q96JX3 654 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 KATNAL1Q9BW62 490 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 TMEM120AQ9BXJ8 343 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 TXLNGYQ9BZA5 131 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 SLC24A2Q9UI40 661 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 DOCK5Q9H7D0 1870 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 B2RBV5 119 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 TADA2AO75478 443 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 ZWINTO95229 277 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 PNPLA4P41247 253 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 FLT3LGP49771 235 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 PPM1JQ5JR12 505 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 ATG16L1Q676U5 607 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 WDR75Q8IWA0 830 aaKnown RBP11.64□□□□□ -0.55
TOP3A-217ENST00000584582 RIBC1Q8N443 379 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-217ENST00000584582 NSMCE1Q8WV22 266 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 SNX27Q96L92 541 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 PTPN18Q99952 460 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 BCO2Q9BYV7 579 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 ACSS3Q9H6R3 686 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 MCM3APO60318 1980 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 TSPAN3O60637 253 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 LYPLA1O75608 230 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-217ENST00000584582 SLC8A1P32418 973 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 PBX3P40426 434 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 TAF11Q15544 211 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 FASTKD1Q53R41 847 aaKnown RBP11.64□□□□□ -0.55
TOP3A-217ENST00000584582 SLC45A4Q5BKX6 768 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 TRNP1Q6NT89 227 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 C4orf50Q6ZRC1 276 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 EFCAB3Q8N7B9 438 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 CMASQ8NFW8 434 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-217ENST00000584582 SCAMP5Q8TAC9 235 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 B3GALT6Q96L58 329 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 THTPAQ9BU02 230 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 CAB39LQ9H9S4 337 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 XPNPEP3Q9NQH7 507 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 IARS2Q9NSE4 1012 aaKnown RBP11.64□□□□□ -0.55
TOP3A-217ENST00000584582 FAM105AQ9NUU6 356 aa11.64□□□□□ -0.55
TOP3A-217ENST00000584582 KNL1Q8NG31 2342 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 SDR42E2A6NKP2 422 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 MDM4O15151 490 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 DNAJC6O75061 913 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 FSBPO95073 299 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 PCSK1P29120 753 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 SERPINB6P35237 376 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 ITIH4Q14624 930 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 MTFR1Q15390 333 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 STRA8Q7Z7C7 330 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 SHCBP1Q8NEM2 672 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 KDM4CQ9H3R0 1056 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 MPP6Q9NZW5 540 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 OR12D3Q9UGF7 316 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 LRFN2Q9ULH4 789 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 MYADML2A6NDP7 307 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 PHGDHO43175 533 aaKnown RBP11.63□□□□□ -0.55
TOP3A-217ENST00000584582 APOEP02649 317 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 POLBP06746 335 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 SETSIPP0DME0 302 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 PEX19P40855 299 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 EFEMP1Q12805 493 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 USP10Q14694 798 aaKnown RBP11.63□□□□□ -0.55
TOP3A-217ENST00000584582 OVOS1Q6IE37 1185 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 UNC5AQ6ZN44 842 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 OSTM1Q86WC4 334 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 ARRDC4Q8NCT1 418 aa11.63□□□□□ -0.55
TOP3A-217ENST00000584582 PCED1BQ96HM7 432 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms