RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 APOEP02649 317 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 GBP2P32456 591 aaPredicted RBP10.81□□□□□ -0.68
CCDC47-203ENST00000580986 HARS2P49590 506 aaKnown RBP10.81□□□□□ -0.68
CCDC47-203ENST00000580986 ZNF135P52742 658 aaPredicted RBP10.81□□□□□ -0.68
CCDC47-203ENST00000580986 TBX4P57082 545 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 PITX1P78337 314 aaPredicted RBP10.81□□□□□ -0.68
CCDC47-203ENST00000580986 ZXDBP98169 803 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 NRG1Q02297 640 aaPredicted RBP10.81□□□□□ -0.68
CCDC47-203ENST00000580986 HTR4Q13639 388 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 Q6ZNB5 142 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 POLNQ7Z5Q5 900 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 SLFN11Q7Z7L1 901 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 MIB1Q86YT6 1006 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 MFSD6LQ8IWD5 586 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 ADHFE1Q8IWW8 467 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 TPCN2Q8NHX9 752 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 BPIFB1Q8TDL5 484 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 ADAMTS19Q8TE59 1207 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 FAM172AQ8WUF8 416 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 BTN2A3PQ96KV6 586 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 FCRL2Q96LA5 508 aaPredicted RBP10.81□□□□□ -0.68
CCDC47-203ENST00000580986 HAPLN3Q96S86 360 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 CYP2S1Q96SQ9 504 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 ADAM33Q9BZ11 813 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 TRIM7Q9C029 511 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 FAM204AQ9H8W3 233 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 PIGVQ9NUD9 493 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 SFMBT1Q9UHJ3 866 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 SALL4Q9UJQ4 1053 aa10.81□□□□□ -0.68
CCDC47-203ENST00000580986 LSM7Q9UK45 103 aaKnown RBP10.81□□□□□ -0.68
CCDC47-203ENST00000580986 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.81□□□□□ -0.68
CCDC47-203ENST00000580986 SLC12A8A0AV02 714 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 GOLGA8CPA6NN73 597 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 C2CD4DB7Z1M9 353 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 LEFTY2O00292 366 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 MDM4O15151 490 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 TFE3P19532 575 aaPredicted RBP10.8□□□□□ -0.68
CCDC47-203ENST00000580986 HTR7P34969 479 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 NOP2P46087 812 aaKnown RBP10.8□□□□□ -0.68
CCDC47-203ENST00000580986 SLC11A2P49281 568 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 ATP11AP98196 1134 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 TFF2Q03403 129 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 C15orf59Q2T9L4 293 aaPredicted RBP10.8□□□□□ -0.68
CCDC47-203ENST00000580986 ARL13BQ3SXY8 428 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 ARHGAP29Q52LW3 1261 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 LRRC38Q5VT99 294 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 PHLDB2Q86SQ0 1253 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 VSIG1Q86XK7 387 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 SYCE1Q8N0S2 351 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 CPXM2Q8N436 756 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 ATP6V0D2Q8N8Y2 350 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 LRRC57Q8N9N7 239 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 TRIM58Q8NG06 486 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 SH3RF2Q8TEC5 729 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 TEKT4Q8WW24 435 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 TRIM44Q96DX7 344 aaPredicted RBP10.8□□□□□ -0.68
CCDC47-203ENST00000580986 C1orf74Q96LT6 269 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 ZNF830Q96NB3 372 aaPredicted RBP10.8□□□□□ -0.68
CCDC47-203ENST00000580986 DDX50Q9BQ39 737 aaKnown RBP10.8□□□□□ -0.68
CCDC47-203ENST00000580986 RETREG1Q9H6L5 497 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 WDCPQ9H6R7 721 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 TRPV5Q9NQA5 729 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 CALCOCO1Q9P1Z2 691 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 SLC12A6Q9UHW9 1150 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 NUDT5Q9UKK9 219 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 DUSP10Q9Y6W6 482 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 UNC80Q8N2C7 3258 aa10.8□□□□□ -0.68
CCDC47-203ENST00000580986 FAM170AA1A519 330 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 HEPACAM2A8MVW5 462 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 GFRA2O00451 464 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 MSI1O43347 362 aaKnown RBP10.79□□□□□ -0.68
CCDC47-203ENST00000580986 BUB1BO60566 1050 aaPredicted RBP10.79□□□□□ -0.68
CCDC47-203ENST00000580986 IL9P15248 144 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 PSMC3P17980 439 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 CORO1AP31146 461 aaKnown RBP10.79□□□□□ -0.68
CCDC47-203ENST00000580986 ADRA1BP35368 520 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 CHKAP35790 457 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 SLC25A11Q02978 314 aaKnown RBP10.79□□□□□ -0.68
CCDC47-203ENST00000580986 ZP2Q05996 745 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 NME3Q13232 169 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 HADHQ16836 314 aaKnown RBP10.79□□□□□ -0.68
CCDC47-203ENST00000580986 CDO1Q16878 200 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 BOLA3Q53S33 107 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 CYP4V2Q6ZWL3 525 aaPredicted RBP10.79□□□□□ -0.68
CCDC47-203ENST00000580986 REXO1L1PQ8IX06 675 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 ARFGAP1Q8N6T3 406 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 ADAM32Q8TC27 787 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 KIAA1524Q8TCG1 905 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 OSCP1Q8WVF1 389 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 FGF14Q92915 247 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 ASB2Q96Q27 587 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 OSBPL2Q9H1P3 480 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 THG1LQ9NWX6 298 aaKnown RBP10.79□□□□□ -0.68
CCDC47-203ENST00000580986 SMPD4Q9NXE4 827 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 CFAP97Q9P2B7 532 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 USP18Q9UMW8 372 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 CCL26Q9Y258 94 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 SH3BP1Q9Y3L3 701 aa10.79□□□□□ -0.68
CCDC47-203ENST00000580986 ZNF487B1APH4 448 aa10.78□□□□□ -0.68
CCDC47-203ENST00000580986 CHADO15335 359 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms