RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 MAFAQ8NHW3 353 aaPredicted RBP13.92□□□□□ -0.18
SRSF1-202ENST00000578430 MYLIPQ8WY64 445 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 FAF2Q96CS3 445 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 CORO1BQ9BR76 489 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 MAK16Q9BXY0 300 aaKnown RBP13.92□□□□□ -0.18
SRSF1-202ENST00000578430 FRMD8P1Q9BZ68 369 aaPredicted RBP13.92□□□□□ -0.18
SRSF1-202ENST00000578430 NACA2Q9H009 215 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 TKTL2Q9H0I9 626 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 DHX35Q9H5Z1 703 aaKnown RBP13.92□□□□□ -0.18
SRSF1-202ENST00000578430 CCSER2Q9H7U1 834 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 SFXN1Q9H9B4 322 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 RASAL2Q9UJF2 1139 aa13.92□□□□□ -0.18
SRSF1-202ENST00000578430 SLC12A8A0AV02 714 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 EFCAB8A8MWE9 144 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 KCNU1A8MYU2 1149 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 KRIT1O00522 736 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 ZNF197O14709 1029 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 COCHO43405 550 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 OLFM2O95897 454 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 ZFXP17010 805 aaPredicted RBP13.91□□□□□ -0.18
SRSF1-202ENST00000578430 HCAR3P49019 387 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 NRG1Q02297 640 aaPredicted RBP13.91□□□□□ -0.18
SRSF1-202ENST00000578430 KLF1Q13351 362 aaPredicted RBP13.91□□□□□ -0.18
SRSF1-202ENST00000578430 KCNC3Q14003 757 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 DPYSL3Q14195 570 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 ZC3H12AQ5D1E8 599 aaKnown RBP13.91□□□□□ -0.18
SRSF1-202ENST00000578430 TMEM184AQ6ZMB5 413 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 BBS12Q6ZW61 710 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 PDZD4Q76G19 769 aaPredicted RBP13.91□□□□□ -0.18
SRSF1-202ENST00000578430 RBM23Q86U06 439 aaKnown RBP13.91□□□□□ -0.18
SRSF1-202ENST00000578430 TTC13Q8NBP0 860 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 TSC1Q92574 1164 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 AZIN2Q96A70 460 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 PLD4Q96BZ4 506 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 ACSF2Q96CM8 615 aaPredicted RBP13.91□□□□□ -0.18
SRSF1-202ENST00000578430 BTN2A3PQ96KV6 586 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 FCRL2Q96LA5 508 aaPredicted RBP13.91□□□□□ -0.18
SRSF1-202ENST00000578430 C1orf74Q96LT6 269 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 RUNDC3BQ96NL0 473 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 CALN1Q9BXU9 219 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 KLHL11Q9NVR0 708 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 GPATCH2LQ9NWQ4 482 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 NUDT5Q9UKK9 219 aa13.91□□□□□ -0.18
SRSF1-202ENST00000578430 CCDC195A0A1B0GUA6 201 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 MSI1O43347 362 aaKnown RBP13.9□□□□□ -0.18
SRSF1-202ENST00000578430 RFPL2O75678 378 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 TBX18O95935 607 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 SEMA3BQ13214 749 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 CA9Q16790 459 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 ARHGAP15Q53QZ3 475 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 AADACL2Q6P093 401 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 GAREM2Q75VX8 874 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 MIB1Q86YT6 1006 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 HS6ST3Q8IZP7 471 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 MMGT1Q8N4V1 131 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 EFHBQ8N7U6 833 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.9□□□□□ -0.18
SRSF1-202ENST00000578430 RNF157Q96PX1 679 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 KCTD15Q96SI1 283 aaPredicted RBP13.9□□□□□ -0.18
SRSF1-202ENST00000578430 EPAS1Q99814 870 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 ATXN3LQ9H3M9 355 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 ATG2AQ2TAZ0 1938 aa13.9□□□□□ -0.18
SRSF1-202ENST00000578430 TRAV19A0A0A6YYK7 116 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 RFXAPO00287 272 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 LATS1O95835 1130 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 RHOP08100 348 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 CD48P09326 243 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 MYL4P12829 197 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 HDCP19113 662 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 IL4RP24394 825 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 HARS2P49590 506 aaKnown RBP13.89□□□□□ -0.19
SRSF1-202ENST00000578430 TERF1P54274 439 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 MLLT6P55198 1093 aaPredicted RBP13.89□□□□□ -0.19
SRSF1-202ENST00000578430 SLC7A9P82251 487 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 CYP1B1Q16678 543 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 ANKRD20A8PQ5CZ79 823 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 PPP6R3Q5H9R7 873 aaPredicted RBP13.89□□□□□ -0.19
SRSF1-202ENST00000578430 CCDC70Q6NSX1 233 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 RFX6Q8HWS3 928 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 C12orf50Q8NA57 414 aaPredicted RBP13.89□□□□□ -0.19
SRSF1-202ENST00000578430 ZNF707Q96C28 371 aaPredicted RBP13.89□□□□□ -0.19
SRSF1-202ENST00000578430 CSPG4P5Q96PW8 444 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 KLF16Q9BXK1 252 aaPredicted RBP13.89□□□□□ -0.19
SRSF1-202ENST00000578430 HEMGNQ9BXL5 484 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 DCLK3Q9C098 648 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 SLITRK6Q9H5Y7 841 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 RETREG1Q9H6L5 497 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 DONSONQ9NYP3 566 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 SMARCAL1Q9NZC9 954 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 STIM2Q9P246 746 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 DNMT3BQ9UBC3 853 aaKnown RBP13.89□□□□□ -0.19
SRSF1-202ENST00000578430 OR12D3Q9UGF7 316 aa13.89□□□□□ -0.19
SRSF1-202ENST00000578430 ANAPC1Q9H1A4 1944 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 A0A1W2PRU2 124 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 C2orf78A6NCI8 922 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 APOC4-APOC2K7ER74 178 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 EEF2KO00418 725 aaKnown RBP13.88□□□□□ -0.19
SRSF1-202ENST00000578430 APOL1O14791 398 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 CST8O60676 142 aa13.88□□□□□ -0.19
SRSF1-202ENST00000578430 PHF2O75151 1096 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms