RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 TGS1Q96RS0 853 aaKnown RBP19.22■□□□□ 0.67
PRKCA-203ENST00000578063 HAPLN3Q96S86 360 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 EPAS1Q99814 870 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 OSBPL2Q9H1P3 480 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 ASB3Q9Y575 518 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 ESYT3A0FGR9 886 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 GRXCR1A8MXD5 290 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 I6L893 689 aaPredicted RBP19.22■□□□□ 0.67
PRKCA-203ENST00000578063 CREB3O43889 395 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 TLR5O60602 858 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 ITGAVP06756 1048 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 PECAM1P16284 738 aaPredicted RBP19.22■□□□□ 0.67
PRKCA-203ENST00000578063 KLRC2P26717 231 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 HCAR3P49019 387 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 NOMO1Q15155 1222 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 OASLQ15646 514 aaKnown RBP19.22■□□□□ 0.67
PRKCA-203ENST00000578063 TRIP4Q15650 581 aaPredicted RBP19.22■□□□□ 0.67
PRKCA-203ENST00000578063 DUPD1Q68J44 220 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 FAM109BQ6ICB4 259 aaPredicted RBP19.22■□□□□ 0.67
PRKCA-203ENST00000578063 RFX8Q6ZV50 586 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 TNS4Q8IZW8 715 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 CASKIN2Q8WXE0 1202 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 PSMG2Q969U7 264 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 SLC39A13Q96H72 371 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 HINFPQ9BQA5 517 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 MAGEB5Q9BZ81 275 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 ARHGEF4Q9NR80 690 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 FAM114A2Q9NRY5 505 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 TRPM5Q9NZQ8 1165 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 MARCH2Q9P0N8 246 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 ZNF148Q9UQR1 794 aa19.22■□□□□ 0.67
PRKCA-203ENST00000578063 ZNF840PA6NDX5 716 aa19.21■□□□□ 0.67
PRKCA-203ENST00000578063 ARHGEF15O94989 841 aa19.21■□□□□ 0.67
PRKCA-203ENST00000578063 GLUD1P00367 558 aa19.21■□□□□ 0.67
PRKCA-203ENST00000578063 C1RP00736 705 aa19.21■□□□□ 0.67
PRKCA-203ENST00000578063 NR2C2P49116 596 aa19.21■□□□□ 0.67
PRKCA-203ENST00000578063 TUBP50607 506 aa19.21■□□□□ 0.67
PRKCA-203ENST00000578063 KPNA1P52294 538 aaPredicted RBP19.21■□□□□ 0.67
PRKCA-203ENST00000578063 DRG2P55039 364 aaKnown RBP19.21■□□□□ 0.67
PRKCA-203ENST00000578063 TBX4P57082 545 aa19.21■□□□□ 0.67
PRKCA-203ENST00000578063 TPI1P60174 286 aa19.21■□□□□ 0.67
PRKCA-203ENST00000578063 PTK6Q13882 451 aa19.21■□□□□ 0.67
PRKCA-203ENST00000578063 TMCO3Q6UWJ1 677 aa19.21■□□□□ 0.67
PRKCA-203ENST00000578063 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.21■□□□□ 0.672e-6■■■■■ 51.6
PRKCA-203ENST00000578063 ARFGAP3Q9NP61 516 aa19.21■□□□□ 0.67
PRKCA-203ENST00000578063 SAE1Q9UBE0 346 aaPredicted RBP19.21■□□□□ 0.67
PRKCA-203ENST00000578063 KCNU1A8MYU2 1149 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 APOEP02649 317 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 DNAJB1P25685 340 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 HTR7P34969 479 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 EIF3EP60228 445 aaKnown RBP19.2■□□□□ 0.66
PRKCA-203ENST00000578063 MTA1Q13330 715 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 DPYSQ14117 519 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 KLHDC10Q6PID8 442 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 DNAJB7Q7Z6W7 309 aaPredicted RBP19.2■□□□□ 0.66
PRKCA-203ENST00000578063 ALLCQ8N6M5 410 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 KREMEN2Q8NCW0 462 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 CCHCR1Q8TD31 782 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 FCRL2Q96LA5 508 aaPredicted RBP19.2■□□□□ 0.66
PRKCA-203ENST00000578063 OR12D3Q9UGF7 316 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 ZNF638Q14966 1978 aaKnown RBP19.2■□□□□ 0.66
PRKCA-203ENST00000578063 HIDE1A8MVS5 230 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 DAPK3O43293 454 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 LRG1P02750 347 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 ERVK-21P61565 698 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 RING1Q06587 406 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 HECTD3Q5T447 861 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 NCBP2-AS2Q69YL0 99 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 PDE12Q6L8Q7 609 aaKnown RBP19.2■□□□□ 0.66
PRKCA-203ENST00000578063 C1orf228Q6PIY5 440 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 RTL10Q7L3V2 364 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 GSTA5Q7RTV2 222 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 MICAL1Q8TDZ2 1067 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 IFT81Q8WYA0 676 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 CCSER2Q9H7U1 834 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 DNMT3LQ9UJW3 386 aa19.2■□□□□ 0.66
PRKCA-203ENST00000578063 HBS1LQ9Y450 684 aaKnown RBP19.2■□□□□ 0.66
PRKCA-203ENST00000578063 FAM72CH0Y354 149 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 GRM6O15303 877 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 PAGE1O75459 146 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 CSPG5O95196 566 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 TBX18O95935 607 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 C8AP07357 584 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 SPATA31D3P0C874 917 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 RBP3P10745 1247 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 AMPD1P23109 780 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 ATP5C1P36542 298 aaKnown RBP19.19■□□□□ 0.66
PRKCA-203ENST00000578063 CARSP49589 748 aaKnown RBP19.19■□□□□ 0.66
PRKCA-203ENST00000578063 ACBD5Q5T8D3 534 aaPredicted RBP19.19■□□□□ 0.66
PRKCA-203ENST00000578063 FAM72AQ5TYM5 149 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 FAM72DQ6L9T8 149 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 NPNTQ6UXI9 565 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 SPATA31D4Q6ZUB0 917 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 BZW1Q7L1Q6 419 aaKnown RBP19.19■□□□□ 0.66
PRKCA-203ENST00000578063 SPRED2Q7Z698 418 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 FAM72BQ86X60 149 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 MIB1Q86YT6 1006 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 CCDC89Q8N998 374 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 TRIM31Q9BZY9 425 aa19.19■□□□□ 0.66
PRKCA-203ENST00000578063 NACA2Q9H009 215 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms