RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 TRIM62Q9BVG3 475 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 MIS12Q9H081 205 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 VPS45Q9NRW7 570 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 THAP10Q9P2Z0 257 aaPredicted RBP12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 AJAP1Q9UKB5 411 aaPredicted RBP12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 PCDHGC3Q9UN70 934 aa12.97□□□□□ -0.33
CSNK1D-206ENST00000577578 CACNA1EQ15878 2313 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 IGLV3-25P01717 112 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 C7P10643 843 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 NCAM1P13591 858 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 EEF1GP26641 437 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 GBP1P32455 592 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 EIF4EBP2Q13542 120 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 BYSLQ13895 437 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 E2F5Q15329 346 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 ARHGAP44Q17R89 818 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 FAM133BQ5BKY9 247 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 TMEM215Q68D42 235 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 KIAA1211LQ6NV74 962 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 KIAA0907Q7Z7F0 614 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 FAM71AQ8IYT1 594 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 WDTC1Q8N5D0 677 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 GPT2Q8TD30 523 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 DQX1Q8TE96 717 aaKnown RBP12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 DDI1Q8WTU0 396 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 SPACA7Q96KW9 195 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 FCRL2Q96LA5 508 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 SERPINB11Q96P15 392 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 LHX5Q9H2C1 402 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 ST7Q9NRC1 585 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 CACNA2D2Q9NY47 1150 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 BCCIPQ9P287 314 aaKnown RBP eCLIP12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 MBD1Q9UIS9 605 aaPredicted RBP12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 NAALADL1Q9UQQ1 740 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 INVSQ9Y283 1065 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 TLR6Q9Y2C9 796 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 STON1Q9Y6Q2 735 aa12.96□□□□□ -0.33
CSNK1D-206ENST00000577578 E5RJQ4 531 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 IRAK2O43187 625 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 TIMM44O43615 452 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 GDF9O60383 454 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 ACSL4O60488 711 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 NDUFV2P19404 249 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 HLA-FP30511 346 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 WASP42768 502 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 SLC11A2P49281 568 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 TBX4P57082 545 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 YWHAZP63104 245 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 KCNMA1Q12791 1236 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 SF3A2Q15428 464 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 CCDC6Q16204 474 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 PIK3R6Q5UE93 754 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 SYPL2Q5VXT5 272 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 FRMD1Q8N878 549 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 ENOX1Q8TC92 643 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 RLN3Q8WXF3 142 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 TMA16Q96EY4 203 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 MRGPRX1Q96LB2 322 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 GBP4Q96PP9 640 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 POPDC2Q9HBU9 364 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 SAMSN1Q9NSI8 373 aaKnown RBP12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 ELOVL2Q9NXB9 296 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 CALCOCO1Q9P1Z2 691 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 DNAJC12Q9UKB3 198 aa12.95□□□□□ -0.34
CSNK1D-206ENST00000577578 KCNJ18B7U540 433 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 WASH3PC4AMC7 463 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 FOXN3O00409 490 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 TM4SF5O14894 197 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 ZNF217O75362 1048 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 CAVIN2O95810 425 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 GLI1P08151 1106 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 SLC6A4P31645 630 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 CLCN1P35523 988 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 IL12RB1P42701 662 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 CREB5Q02930 508 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 PTK2Q05397 1052 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 KCNJ12Q14500 433 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 TCP11X2Q5H9J9 407 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 CDKAL1Q5VV42 579 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 PEAR1Q5VY43 1037 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 NADSYN1Q6IA69 706 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 LPCAT2Q7L5N7 544 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 METTL3Q86U44 580 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 TAC4Q86UU9 113 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 ZNF557Q8N988 423 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 C12orf50Q8NA57 414 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 WFIKKN2Q8TEU8 576 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 UCMAQ8WVF2 138 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 FAM149B1Q96BN6 582 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 CPXM1Q96SM3 734 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 NAA15Q9BXJ9 866 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 RXFP3Q9NSD7 469 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 ASNSD1Q9NWL6 643 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 NFE2L3Q9Y4A8 694 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 RAD54BQ9Y620 910 aa12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 TPRP12270 2363 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-206ENST00000577578 IGHV1OR15-9A0A0B4J2B8 117 aa12.93□□□□□ -0.34
CSNK1D-206ENST00000577578 TSPAN3O60637 253 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms