RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 ZNF217O75362 1048 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 GABRG2P18507 467 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 BCKDHBP21953 392 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 ATXN1P54253 815 aaKnown RBP16.14■□□□□ 0.17
SF3B3-215ENST00000577085 BPIFB4P59827 614 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 YWHAZP63104 245 aaKnown RBP16.14■□□□□ 0.17
SF3B3-215ENST00000577085 RING1Q06587 406 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 PDCLQ13371 301 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 RAPGEF1Q13905 1077 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 GEN1Q17RS7 908 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 SLC36A4Q6YBV0 504 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 PASD1Q8IV76 773 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 SHC3Q92529 594 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 SLC4A5Q9BY07 1137 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 SMOC1Q9H4F8 434 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 POPDC2Q9HBU9 364 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 STOML2Q9UJZ1 356 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 PLA2G4CQ9UP65 541 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 NAALADL1Q9UQQ1 740 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 TLR6Q9Y2C9 796 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 STON1Q9Y6Q2 735 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 GPR179Q6PRD1 2367 aa16.14■□□□□ 0.17
SF3B3-215ENST00000577085 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 A0A1W2PQF6 199 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 BCLAF3A2AJT9 711 aaKnown RBP16.13■□□□□ 0.17
SF3B3-215ENST00000577085 BECN2A8MW95 431 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 AP5Z1O43299 807 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 GDF9O60383 454 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 ACSL4O60488 711 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 APOEP02649 317 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 EEF1GP26641 437 aaKnown RBP16.13■□□□□ 0.17
SF3B3-215ENST00000577085 HOXD9P28356 352 aaPredicted RBP16.13■□□□□ 0.17
SF3B3-215ENST00000577085 RPL34P49207 117 aaKnown RBP16.13■□□□□ 0.17
SF3B3-215ENST00000577085 RPL6Q02878 288 aaKnown RBP16.13■□□□□ 0.17
SF3B3-215ENST00000577085 PLA2G2CQ5R387 149 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 SASS6Q6UVJ0 657 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 KIAA1324Q6UXG2 1013 aaKnown RBP16.13■□□□□ 0.17
SF3B3-215ENST00000577085 SERPINA13PQ6UXR4 307 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 ARMCX6Q7L4S7 300 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 TMEM110Q86TL2 294 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 TMEFF1Q8IYR6 380 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 ZNF557Q8N988 423 aaPredicted RBP16.13■□□□□ 0.17
SF3B3-215ENST00000577085 ADAM32Q8TC27 787 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 DQX1Q8TE96 717 aaKnown RBP16.13■□□□□ 0.17
SF3B3-215ENST00000577085 PIGKQ92643 395 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 PIWIL1Q96J94 861 aaKnown RBP16.13■□□□□ 0.17
SF3B3-215ENST00000577085 PPP1R13BQ96KQ4 1090 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 ELOVL2Q9NXB9 296 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 HCN2Q9UL51 889 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 NFE2L3Q9Y4A8 694 aa16.13■□□□□ 0.17
SF3B3-215ENST00000577085 DCDC2BA2VCK2 349 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 WASH3PC4AMC7 463 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 SLC30A4O14863 429 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 KHNYNO15037 678 aaKnown RBP16.12■□□□□ 0.17
SF3B3-215ENST00000577085 PAPSS1O43252 624 aaPredicted RBP16.12■□□□□ 0.17
SF3B3-215ENST00000577085 TBL1XO60907 577 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 NDUFS2O75306 463 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 MOCS2O96007 188 aaPredicted RBP16.12■□□□□ 0.17
SF3B3-215ENST00000577085 IGLV3-27P01718 113 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 NDUFV2P19404 249 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 KCNA4P22459 653 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 DPP6P42658 865 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 NNTQ13423 1086 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 MAP7D1Q3KQU3 841 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 TCP11X2Q5H9J9 407 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 SPDYCQ5MJ68 293 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 LYSMD4Q5XG99 296 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 SMYD5Q6GMV2 418 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 KIAA1211LQ6NV74 962 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 RFWD3Q6PCD5 774 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 BEND5Q7L4P6 421 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 AHI1Q8N157 1196 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 HJURPQ8NCD3 748 aaPredicted RBP16.12■□□□□ 0.17
SF3B3-215ENST00000577085 WFIKKN2Q8TEU8 576 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 DDX1Q92499 740 aaKnown RBP16.12■□□□□ 0.17
SF3B3-215ENST00000577085 RNF34Q969K3 372 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 AZIN2Q96A70 460 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 P2RY11Q96G91 374 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 IRX2Q9BZI1 471 aaPredicted RBP16.12■□□□□ 0.17
SF3B3-215ENST00000577085 FAM204AQ9H8W3 233 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 SAMSN1Q9NSI8 373 aaKnown RBP16.12■□□□□ 0.17
SF3B3-215ENST00000577085 ABCB8Q9NUT2 735 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 STIM2Q9P246 746 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 THAP10Q9P2Z0 257 aaPredicted RBP16.12■□□□□ 0.17
SF3B3-215ENST00000577085 SLC12A6Q9UHW9 1150 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 CLEC4EQ9ULY5 219 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 PCDHGC3Q9UN70 934 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 EML5Q05BV3 1969 aa16.12■□□□□ 0.17
SF3B3-215ENST00000577085 DCHS1Q96JQ0 3298 aa16.11■□□□□ 0.17
SF3B3-215ENST00000577085 GOLGA6L7A0A1B0GV03 622 aa16.11■□□□□ 0.17
SF3B3-215ENST00000577085 FOXN3O00409 490 aaPredicted RBP16.11■□□□□ 0.17
SF3B3-215ENST00000577085 FYNP06241 537 aa16.11■□□□□ 0.17
SF3B3-215ENST00000577085 ATP5BP06576 529 aaKnown RBP16.11■□□□□ 0.17
SF3B3-215ENST00000577085 EPHX1P07099 455 aa16.11■□□□□ 0.17
SF3B3-215ENST00000577085 IL12RB1P42701 662 aa16.11■□□□□ 0.17
SF3B3-215ENST00000577085 CDK17Q00537 523 aa16.11■□□□□ 0.17
SF3B3-215ENST00000577085 ZNF234Q14588 700 aa16.11■□□□□ 0.17
SF3B3-215ENST00000577085 FNDC3BQ53EP0 1204 aaKnown RBP16.11■□□□□ 0.17
SF3B3-215ENST00000577085 DCAF6Q58WW2 860 aa16.11■□□□□ 0.17
SF3B3-215ENST00000577085 EFHC1Q5JVL4 640 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms