RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ARHGAP18Q8N392 663 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 CSGALNACT1Q8TDX6 532 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 RXFP2Q8WXD0 754 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 SYN2Q92777 582 aaPredicted RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 DNASE1L2Q92874 299 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 IRF7Q92985 503 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 NXPE3Q969Y0 559 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 C16orf45Q96MC5 204 aaPredicted RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 LRFN3Q9BTN0 628 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 POPDC2Q9HBU9 364 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 DDIT4Q9NX09 232 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 TRMT1Q9NXH9 659 aaKnown RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 ADAM22Q9P0K1 906 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 ADAMTS1Q9UHI8 967 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 MYO6Q9UM54 1294 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 REXO2Q9Y3B8 237 aaKnown RBP8.23□□□□□ -1.09
CCDC40-215ENST00000576033 DAAM1Q9Y4D1 1078 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 MUC6Q6W4X9 2439 aa8.23□□□□□ -1.09
CCDC40-215ENST00000576033 A0A0U1RQJ8 604 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 E2F8A0AVK6 867 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 M0QYT0 321 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 NDUFA10O95299 355 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 SERPING1P05155 500 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 CCDC175P0C221 793 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 ADH5P11766 374 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 TCF4P15884 667 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 RFC1P35251 1148 aaPredicted RBP8.22□□□□□ -1.09
CCDC40-215ENST00000576033 ARHGAP25P42331 645 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 SEC13P55735 322 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 ETF1P62495 437 aaKnown RBP8.22□□□□□ -1.09
CCDC40-215ENST00000576033 FZD5Q13467 585 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 EIF4EBP2Q13542 120 aaPredicted RBP8.22□□□□□ -1.09
CCDC40-215ENST00000576033 GAS6Q14393 721 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 ASTE1Q2TB18 679 aaPredicted RBP8.22□□□□□ -1.09
CCDC40-215ENST00000576033 ANO4Q32M45 955 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 ITPRIPL2Q3MIP1 535 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 CCDC14Q49A88 953 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 PPP1R15BQ5SWA1 713 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 ARTNQ5T4W7 220 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 PIK3R6Q5UE93 754 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 FYB2Q5VWT5 728 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 RAP1GAP2Q684P5 730 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 DNAJC24Q6P3W2 148 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 TRIM72Q6ZMU5 477 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 HTR3DQ70Z44 454 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 C14orf80Q86SX3 495 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 FAM131BQ86XD5 332 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 CCDC170Q8IYT3 715 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 ADGRG2Q8IZP9 1017 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 CFAP52Q8N1V2 620 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 PJA1Q8NG27 643 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 ATRIPQ8WXE1 791 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 GOLGA1Q92805 767 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 ATP2A3Q93084 1043 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 PBXIP1Q96AQ6 731 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 ZNF653Q96CK0 615 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 SLC39A13Q96H72 371 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 NOX5Q96PH1 765 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 DDX23Q9BUQ8 820 aaKnown RBP8.22□□□□□ -1.09
CCDC40-215ENST00000576033 THAP2Q9H0W7 228 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 MFSD1Q9H3U5 465 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 L2HGDHQ9H9P8 463 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 LTB4R2Q9NPC1 389 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 MYO1AQ9UBC5 1043 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 STRIP2Q9ULQ0 834 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 FRYLO94915 3013 aa8.22□□□□□ -1.09
CCDC40-215ENST00000576033 WDR87Q6ZQQ6 2873 aa8.21□□□□□ -1.09
CCDC40-215ENST00000576033 EML5Q05BV3 1969 aa8.21□□□□□ -1.09
CCDC40-215ENST00000576033 SSU72P8A0A1W2PR75 194 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 C2CD4BA6NLJ0 364 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 SOBPA7XYQ1 873 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 EIF3CLB5ME19 914 aaKnown RBP8.21□□□□□ -1.1
CCDC40-215ENST00000576033 GFRA2O00451 464 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 STK25O00506 426 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 FTLP02792 175 aaPredicted RBP8.21□□□□□ -1.1
CCDC40-215ENST00000576033 CHRM1P11229 460 aaPredicted RBP8.21□□□□□ -1.1
CCDC40-215ENST00000576033 PFKLP17858 780 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 HOXD9P28356 352 aaPredicted RBP8.21□□□□□ -1.1
CCDC40-215ENST00000576033 MATKP42679 507 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 HDAC4P56524 1084 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 STARD6P59095 220 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 RPS24P62847 133 aaKnown RBP8.21□□□□□ -1.1
CCDC40-215ENST00000576033 PDGFRLQ15198 375 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 EFHC1Q5JVL4 640 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 TMEM31Q5JXX7 168 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 BNIPLQ7Z465 357 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 PHTF2Q8N3S3 785 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 CPA6Q8N4T0 437 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 CCDC185Q8N715 623 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 ZNF397Q8NF99 534 aaPredicted RBP8.21□□□□□ -1.1
CCDC40-215ENST00000576033 MYRIPQ8NFW9 859 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 FAM3CQ92520 227 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 E2F7Q96AV8 911 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 PLD4Q96BZ4 506 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 SERPINB11Q96P15 392 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 PEBP4Q96S96 227 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 NPY6RQ99463 290 aa8.21□□□□□ -1.1
CCDC40-215ENST00000576033 EIF3CQ99613 913 aaKnown RBP8.21□□□□□ -1.1
CCDC40-215ENST00000576033 DESI2Q9BSY9 194 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms