RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 HHIPQ96QV1 700 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 PNKPQ96T60 521 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 ACOX2Q99424 681 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 NPY6RQ99463 290 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 NACA2Q9H009 215 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 NUCKS1Q9H1E3 243 aaKnown RBP9.04□□□□□ -0.96
SMG6-216ENST00000575176 POPDC2Q9HBU9 364 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 ARHGEF4Q9NR80 690 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 ST7Q9NRC1 585 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 ZSCAN32Q9NX65 697 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 PLK2Q9NYY3 685 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 LSM7Q9UK45 103 aaKnown RBP9.04□□□□□ -0.96
SMG6-216ENST00000575176 MMP17Q9ULZ9 603 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 TLR6Q9Y2C9 796 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 PLXNA2O75051 1894 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 NUMA1Q14980 2115 aa9.04□□□□□ -0.96
SMG6-216ENST00000575176 CACNA1EQ15878 2313 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 GOLGA6L7A0A1B0GV03 622 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 A0A1W2PQC6 194 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 HRO43593 1189 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 HSF2BPO75031 334 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 TRUB2O95900 331 aaKnown RBP9.03□□□□□ -0.96
SMG6-216ENST00000575176 GLI1P08151 1106 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 NCAM1P13591 858 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 MMP8P22894 467 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 HLA-FP30511 346 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 GRIA2P42262 883 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 CXCL12P48061 93 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 FNTBP49356 437 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 SEC13P55735 322 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 YWHAZP63104 245 aaKnown RBP9.03□□□□□ -0.96
SMG6-216ENST00000575176 SLC6A3Q01959 620 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 UBXN1Q04323 297 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 DMC1Q14565 340 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 NR1I3Q14994 352 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 PPP1R15BQ5SWA1 713 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 RFWD3Q6PCD5 774 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 MON1BQ7L1V2 547 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 RSRC2Q7L4I2 434 aaKnown RBP9.03□□□□□ -0.96
SMG6-216ENST00000575176 ALYREFQ86V81 257 aaKnown RBP9.03□□□□□ -0.96
SMG6-216ENST00000575176 WDR5BQ86VZ2 330 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 DEFB106AQ8N104 65 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 ALLCQ8N6M5 410 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 MDGA1Q8NFP4 955 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 BHMTQ93088 406 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 AZIN2Q96A70 460 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 PGAP3Q96FM1 320 aaPredicted RBP9.03□□□□□ -0.96
SMG6-216ENST00000575176 SERPINB11Q96P15 392 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 GABRG3Q99928 467 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 BBS2Q9BXC9 721 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 FAM126AQ9BYI3 521 aaPredicted RBP9.03□□□□□ -0.96
SMG6-216ENST00000575176 DCLK3Q9C098 648 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 PIGVQ9NUD9 493 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 DNAJC17Q9NVM6 304 aaKnown RBP9.03□□□□□ -0.96
SMG6-216ENST00000575176 ZNF212Q9UDV6 495 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 INTS6Q9UL03 887 aaKnown RBP9.03□□□□□ -0.96
SMG6-216ENST00000575176 NENFQ9UMX5 172 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 ASPMQ8IZT6 3477 aa9.03□□□□□ -0.96
SMG6-216ENST00000575176 CCDC163A0A0D9SF12 145 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 C10orf142B7Z368 130 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 SART1O43290 800 aaKnown RBP9.02□□□□□ -0.97
SMG6-216ENST00000575176 ACSL4O60488 711 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 GRAP2O75791 330 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 GJB6O95452 261 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 PRKCIP41743 596 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 TNFRSF4P43489 277 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 PXNP49023 591 aaPredicted RBP9.02□□□□□ -0.97
SMG6-216ENST00000575176 ATXN1P54253 815 aaKnown RBP9.02□□□□□ -0.97
SMG6-216ENST00000575176 TBX4P57082 545 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 MRPS21P82921 87 aaKnown RBP9.02□□□□□ -0.97
SMG6-216ENST00000575176 GOLGA8FQ08AF8 430 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 GOLGA8DPQ0D2H9 430 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 NR1H3Q13133 447 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 CRY1Q16526 586 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 PTPRNQ16849 979 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 CLEC16AQ2KHT3 1053 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 ANO4Q32M45 955 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 C5orf22Q49AR2 442 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 C2orf27AQ580R0 203 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 FIGNQ5HY92 759 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 FKBP15Q5T1M5 1219 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 ADGRF1Q5T601 910 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 NAA35Q5VZE5 725 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 NUGGCQ68CJ6 796 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 HGSNATQ68CP4 663 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 KIAA1211LQ6NV74 962 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 ARCQ7LC44 396 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 ADIPOR2Q86V24 386 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 ZNF677Q86XU0 584 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 OR52K2Q8NGK3 314 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 JOSD2Q8TAC2 188 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 CPA5Q8WXQ8 436 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 FAM149B1Q96BN6 582 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 IRF2BPLQ9H1B7 796 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 CD93Q9NPY3 652 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 TMPRSS4Q9NRS4 437 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 TAS2R14Q9NYV8 317 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 EBF1Q9UH73 591 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 STRIP2Q9ULQ0 834 aa9.02□□□□□ -0.97
SMG6-216ENST00000575176 SMG5Q9UPR3 1016 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms