RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ARL13BQ3SXY8 428 aa17.74■□□□□ 0.43
NUP88-210ENST00000574867 ACBD5Q5T8D3 534 aaPredicted RBP17.74■□□□□ 0.43
NUP88-210ENST00000574867 FAM131BQ86XD5 332 aa17.74■□□□□ 0.43
NUP88-210ENST00000574867 DENND1CQ8IV53 801 aa17.74■□□□□ 0.43
NUP88-210ENST00000574867 ST13P5Q8NFI4 369 aaPredicted RBP17.74■□□□□ 0.43
NUP88-210ENST00000574867 RSAD2Q8WXG1 361 aa17.74■□□□□ 0.43
NUP88-210ENST00000574867 WBP2Q969T9 261 aa17.74■□□□□ 0.43
NUP88-210ENST00000574867 BTBD6Q96KE9 485 aa17.74■□□□□ 0.43
NUP88-210ENST00000574867 RPP25Q9BUL9 199 aaKnown RBP17.74■□□□□ 0.43
NUP88-210ENST00000574867 STOML2Q9UJZ1 356 aa17.74■□□□□ 0.43
NUP88-210ENST00000574867 AGO1Q9UL18 857 aaKnown RBP17.74■□□□□ 0.43
NUP88-210ENST00000574867 PPP2R2CQ9Y2T4 447 aa17.74■□□□□ 0.43
NUP88-210ENST00000574867 TCF20Q9UGU0 1960 aaKnown RBP17.74■□□□□ 0.43
NUP88-210ENST00000574867 CHADO15335 359 aa17.73■□□□□ 0.43
NUP88-210ENST00000574867 ATXN1P54253 815 aaKnown RBP17.73■□□□□ 0.43
NUP88-210ENST00000574867 AIF1P55008 147 aa17.73■□□□□ 0.43
NUP88-210ENST00000574867 IFI16Q16666 785 aaKnown RBP17.73■□□□□ 0.43
NUP88-210ENST00000574867 NTAN1Q96AB6 310 aa17.73■□□□□ 0.43
NUP88-210ENST00000574867 DDX50Q9BQ39 737 aaKnown RBP17.73■□□□□ 0.43
NUP88-210ENST00000574867 TKTL2Q9H0I9 626 aa17.73■□□□□ 0.43
NUP88-210ENST00000574867 DUS2Q9NX74 493 aaKnown RBP17.73■□□□□ 0.43
NUP88-210ENST00000574867 LRCH4O75427 683 aa17.73■□□□□ 0.43
NUP88-210ENST00000574867 MOCS2O96007 188 aaPredicted RBP17.73■□□□□ 0.43
NUP88-210ENST00000574867 ASGR2P07307 311 aa17.73■□□□□ 0.43
NUP88-210ENST00000574867 TDGQ13569 410 aa17.73■□□□□ 0.43
NUP88-210ENST00000574867 C11orf63Q6NUN7 778 aa17.73■□□□□ 0.43
NUP88-210ENST00000574867 BBS7Q8IWZ6 715 aa17.73■□□□□ 0.43
NUP88-210ENST00000574867 SLC44A3Q8N4M1 653 aa17.73■□□□□ 0.43
NUP88-210ENST00000574867 ATP2A3Q93084 1043 aa17.73■□□□□ 0.43
NUP88-210ENST00000574867 WNT6Q9Y6F9 365 aa17.73■□□□□ 0.43
NUP88-210ENST00000574867 ACSL4O60488 711 aa17.72■□□□□ 0.43
NUP88-210ENST00000574867 CHKAP35790 457 aa17.72■□□□□ 0.43
NUP88-210ENST00000574867 MESDQ14696 234 aa17.72■□□□□ 0.43
NUP88-210ENST00000574867 FAM217AQ8IXS0 508 aa17.72■□□□□ 0.43
NUP88-210ENST00000574867 IRF7Q92985 503 aa17.72■□□□□ 0.43
NUP88-210ENST00000574867 FAM83CQ9BQN1 747 aa17.72■□□□□ 0.43
NUP88-210ENST00000574867 DUSP10Q9Y6W6 482 aa17.72■□□□□ 0.43
NUP88-210ENST00000574867 ZSCAN12O43309 604 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 PRPSAP2O60256 369 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 GDI1P31150 447 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 SLC1A1P43005 524 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 NAP1L1P55209 391 aaKnown RBP17.71■□□□□ 0.43
NUP88-210ENST00000574867 SCAPQ12770 1279 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 EML3Q32P44 896 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 RAB6CQ53S08 254 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 ADGRF1Q5T601 910 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 SCYL2Q6P3W7 929 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 GJD3Q8N144 294 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 CPXM2Q8N436 756 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 RNF10Q8N5U6 811 aaKnown RBP17.71■□□□□ 0.43
NUP88-210ENST00000574867 ARFGAP1Q8N6T3 406 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 ASIC4Q96FT7 647 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 HAPLN3Q96S86 360 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 IRX2Q9BZI1 471 aaPredicted RBP17.71■□□□□ 0.43
NUP88-210ENST00000574867 RAB6CQ9H0N0 254 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 BRD9Q9H8M2 597 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 SALL4Q9UJQ4 1053 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 SCAMP3O14828 347 aaKnown RBP17.71■□□□□ 0.43
NUP88-210ENST00000574867 NFATC1O95644 943 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 MIPP30301 263 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 SLFN11Q7Z7L1 901 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 TPCN2Q8NHX9 752 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 USP18Q9UMW8 372 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 SORCS3Q9UPU3 1222 aa17.71■□□□□ 0.43
NUP88-210ENST00000574867 MACROD2A1Z1Q3 448 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 BUB1O43683 1085 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 BUB1BO60566 1050 aaPredicted RBP17.7■□□□□ 0.42
NUP88-210ENST00000574867 PAGE1O75459 146 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 SRFP11831 508 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 ADRA1BP35368 520 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 CCDC185Q8N715 623 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 DNASE1L2Q92874 299 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 ZFYVE19Q96K21 471 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 TRPV5Q9NQA5 729 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 TRIM10Q9UDY6 481 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.7■□□□□ 0.42
NUP88-210ENST00000574867 A0A0U1RQJ8 604 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 TMEM110-MUSTN1A8MSY1 372 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 ARNTLO00327 626 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 PFKPQ01813 784 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 HADHQ16836 314 aaKnown RBP17.7■□□□□ 0.42
NUP88-210ENST00000574867 FAM133BQ5BKY9 247 aaKnown RBP17.7■□□□□ 0.42
NUP88-210ENST00000574867 MS4A13Q5J8X5 152 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 EFHC2Q5JST6 749 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 RNF135Q8IUD6 432 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 PSTKQ8IV42 348 aaKnown RBP17.7■□□□□ 0.42
NUP88-210ENST00000574867 CPA6Q8N4T0 437 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 ATRIPQ8WXE1 791 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 C1orf74Q96LT6 269 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 SLC2A4RGQ9NR83 387 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 XPO7Q9UIA9 1087 aaKnown RBP17.7■□□□□ 0.42
NUP88-210ENST00000574867 DUSP12Q9UNI6 340 aa17.7■□□□□ 0.42
NUP88-210ENST00000574867 COL4A2P08572 1712 aa17.69■□□□□ 0.42
NUP88-210ENST00000574867 ADH1CP00326 375 aa17.69■□□□□ 0.42
NUP88-210ENST00000574867 SLC25A11Q02978 314 aaKnown RBP17.69■□□□□ 0.42
NUP88-210ENST00000574867 PIK3R6Q5UE93 754 aa17.69■□□□□ 0.42
NUP88-210ENST00000574867 TRIM68Q6AZZ1 485 aa17.69■□□□□ 0.42
NUP88-210ENST00000574867 NADSYN1Q6IA69 706 aa17.69■□□□□ 0.42
NUP88-210ENST00000574867 DAAM2Q86T65 1068 aa17.69■□□□□ 0.42
NUP88-210ENST00000574867 CHSY1Q86X52 802 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms