RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 CDY1Q9Y6F8 540 aa30.13■■■□□ 2.41
CTDNEP1-208ENST00000573600 BAIAP3O94812 1187 aa30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 YWHAQP27348 245 aa30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 RBL1P28749 1068 aa30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 TPI1P60174 286 aa30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 WDR5P61964 334 aaKnown RBP30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 GABPB1Q06547 395 aaPredicted RBP30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 SLC29A2Q14542 456 aa30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 PAFAH1B3Q15102 231 aaKnown RBP30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 PSMD5Q16401 504 aa30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 PDZD4Q76G19 769 aaPredicted RBP30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 CROCCP2Q86T23 111 aa30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 OR2W6PQ8NHA6 318 aa30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 QKIQ96PU8 341 aaKnown RBP eCLIP30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 EPAS1Q99814 870 aa30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 OSBPL2Q9H1P3 480 aa30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 NMUR1Q9HB89 426 aa30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 TMBIM4Q9HC24 238 aa30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 ARHGEF38Q9NXL2 777 aa30.12■■■□□ 2.41
CTDNEP1-208ENST00000573600 DEFB103AP81534 67 aa30.11■■■□□ 2.41
CTDNEP1-208ENST00000573600 TTC9BQ8N6N2 239 aa30.11■■■□□ 2.41
CTDNEP1-208ENST00000573600 PRCCQ92733 491 aaPredicted RBP30.11■■■□□ 2.41
CTDNEP1-208ENST00000573600 ARL8AQ96BM9 186 aa30.11■■■□□ 2.41
CTDNEP1-208ENST00000573600 CEP295NLQ96MC4 621 aa30.11■■■□□ 2.41
CTDNEP1-208ENST00000573600 OLFM3Q96PB7 478 aa30.11■■■□□ 2.41
CTDNEP1-208ENST00000573600 SEPT5Q99719 369 aaPredicted RBP30.11■■■□□ 2.41
CTDNEP1-208ENST00000573600 SLC27A5Q9Y2P5 690 aa30.11■■■□□ 2.41
CTDNEP1-208ENST00000573600 RAD54BQ9Y620 910 aa30.11■■■□□ 2.41
CTDNEP1-208ENST00000573600 GOLGA6CA6NDK9 693 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 I6L893 689 aaPredicted RBP30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 ZNF189O75820 626 aaPredicted RBP30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 VNN2O95498 520 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 GOLGA6DP0CG33 693 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 PSEN1P49768 467 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 TTMPQ5BVD1 217 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 KIAA1841Q6NSI8 718 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 MSANTD2Q6P1R3 559 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 CPT1BQ92523 772 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 SERPINB11Q96P15 392 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 RBM15Q96T37 977 aaKnown RBP eCLIP30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 PHACTR1Q9C0D0 580 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 GOLGA6AQ9NYA3 693 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 ZNF638Q14966 1978 aaKnown RBP30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 DCLK1O15075 740 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 SOD2P04179 222 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 LAG3P18627 525 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 CCR1P32246 355 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 PPP2R5DQ14738 602 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 NAT8LQ8N9F0 302 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 CASP10Q92851 521 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 VN1R3Q9BXE9 311 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 OR12D3Q9UGF7 316 aa30.1■■■□□ 2.41
CTDNEP1-208ENST00000573600 FAM72CH0Y354 149 aa30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 MAP3K6O95382 1288 aa30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 TTC4O95801 387 aa30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 USP46P62068 366 aa30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 BTG3Q14201 252 aaPredicted RBP30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 FAM72AQ5TYM5 149 aa30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 FAM72DQ6L9T8 149 aa30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 B4GALNT4Q76KP1 1039 aa30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 FAM72BQ86X60 149 aa30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 SLC39A11Q8N1S5 342 aa30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 TFB1MQ8WVM0 346 aaKnown RBP30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 FBXO32Q969P5 355 aa30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 TMEM169Q96HH4 297 aa30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 HAPLN3Q96S86 360 aa30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 CLIC5Q9NZA1 410 aa30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 GREB1Q4ZG55 1949 aa30.09■■■□□ 2.41
CTDNEP1-208ENST00000573600 HMGB1P1B2RPK0 211 aaPredicted RBP30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 MFSD11O43934 449 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 PGFP49763 221 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 DUSP4Q13115 394 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 ATP6V1G3Q96LB4 118 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 FERMT1Q9BQL6 677 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 CRISPLD1Q9H336 500 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 GMIPQ9P107 970 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 WDR27A2RRH5 827 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 ERCC2P18074 760 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 HTR7P34969 479 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 PDK1Q15118 436 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 HEATR6Q6AI08 1181 aaKnown RBP30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 FAM117BQ6P1L5 589 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 CENPUQ71F23 418 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 PWWP2AQ96N64 755 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 TMEM109Q9BVC6 243 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 HERC2P3Q9BVR0 1158 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 TLR8Q9NR97 1041 aaKnown RBP30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 OLA1Q9NTK5 396 aaKnown RBP30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 DNAJC17Q9NVM6 304 aaKnown RBP30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 OSER1Q9NX31 292 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 SFMBT1Q9UHJ3 866 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 MFHAS1Q9Y4C4 1052 aa30.08■■■□□ 2.41
CTDNEP1-208ENST00000573600 PPP1R12AO14974 1030 aaPredicted RBP30.07■■■□□ 2.4
CTDNEP1-208ENST00000573600 GCATO75600 419 aa30.07■■■□□ 2.4
CTDNEP1-208ENST00000573600 TUFMP49411 452 aaKnown RBP30.07■■■□□ 2.4
CTDNEP1-208ENST00000573600 BASP1P80723 227 aaKnown RBP30.07■■■□□ 2.4
CTDNEP1-208ENST00000573600 KRT71Q3SY84 523 aa30.07■■■□□ 2.4
CTDNEP1-208ENST00000573600 STKLD1Q8NE28 680 aa30.07■■■□□ 2.4
CTDNEP1-208ENST00000573600 FAM76AQ8TAV0 307 aa30.07■■■□□ 2.4
CTDNEP1-208ENST00000573600 IL23AQ9NPF7 189 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms