RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 CYTH4Q9UIA0 394 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 VANGL2Q9ULK5 521 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 ETFBP38117 255 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 OGDHQ02218 1023 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 PPM1LQ5SGD2 360 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 BEND6Q5SZJ8 279 aaPredicted RBP12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 PLPP4Q5VZY2 271 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 RASGEF1CQ8N431 466 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 AUTS2Q8WXX7 1259 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 GPR62Q9BZJ7 368 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 OGDHLQ9ULD0 1010 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 F8W810 466 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 TLR5O60602 858 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 ADH1AP07327 375 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 ZSCAN5DPP0CG00 497 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 TCF4P15884 667 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 ARHGAP15Q53QZ3 475 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 NXNQ6DKJ4 435 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 UNC45BQ8IWX7 931 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 C3orf58Q8NDZ4 430 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 HNRNPLLQ8WVV9 542 aaKnown RBP12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 CDK5RAP1Q96SZ6 601 aaKnown RBP12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 SMOQ99835 787 aa12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 DDX23Q9BUQ8 820 aaKnown RBP12.54□□□□□ -0.4
TMEM170A-205ENST00000568559 GOLGA8RI6L899 631 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 FANCGO15287 622 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 ATP9BO43861 1147 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 CDH5P33151 784 aaPredicted RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 AVPR1AP37288 418 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 KPNA1P52294 538 aaPredicted RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 GTF2A1P52655 376 aaPredicted RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 PPIL6Q8IXY8 311 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 OR2W6PQ8NHA6 318 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 AGR3Q8TD06 166 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 TTC25Q96NG3 672 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 TMEM175Q9BSA9 504 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 PCDH18Q9HCL0 1135 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 PIH1D1Q9NWS0 290 aaKnown RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 NR2E1Q9Y466 385 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 MDM4O15151 490 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 CD48P09326 243 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 RPL21P46778 160 aaKnown RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 FAM26DQ5JW98 314 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 HECTD3Q5T447 861 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 BBS12Q6ZW61 710 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 PRUNE1Q86TP1 453 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 UXTQ9UBK9 157 aaPredicted RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 R3HDM2Q9Y2K5 976 aaKnown RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 ZNFX1Q9P2E3 1918 aaKnown RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 KCNK1O00180 336 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 SH3BP5O60239 455 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 ADRA1BP35368 520 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 PTPN9P43378 593 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 PEX5P50542 639 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 ADCY2Q08462 1091 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 ZNF177Q13360 481 aaPredicted RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 C6orf118Q5T5N4 469 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 SYPL2Q5VXT5 272 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 FAM136AQ96C01 138 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 IFT43Q96FT9 208 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 FUBP3Q96I24 572 aaKnown RBP eCLIP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 TOX2Q96NM4 488 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 SYT11Q9BT88 431 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 C3orf70A6NLC5 250 aaPredicted RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 H0Y626 953 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 MTSS1O43312 755 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 JCHAINP01591 159 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 RBL1P28749 1068 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 PSEN1P49768 467 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 RNF219Q5W0B1 726 aaPredicted RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 TXNRD3NBQ6F5E7 133 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 OLFML1Q6UWY5 402 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 ATP11CQ8NB49 1132 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 DQX1Q8TE96 717 aaKnown RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 SREK1Q8WXA9 508 aaKnown RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 PIWIL1Q96J94 861 aaKnown RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 CFHR5Q9BXR6 569 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 OSBPL7Q9BZF2 842 aa12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 SARS2Q9NP81 518 aaKnown RBP12.53□□□□□ -0.4
TMEM170A-205ENST00000568559 OTOFQ9HC10 1997 aa12.52□□□□□ -0.4
TMEM170A-205ENST00000568559 LOXHD1Q8IVV2 1947 aa12.52□□□□□ -0.4
TMEM170A-205ENST00000568559 BEST1O76090 585 aa12.52□□□□□ -0.4
TMEM170A-205ENST00000568559 ETS1P14921 441 aa12.52□□□□□ -0.4
TMEM170A-205ENST00000568559 DSC3Q14574 896 aa12.52□□□□□ -0.4
TMEM170A-205ENST00000568559 PSRC1Q6PGN9 363 aaPredicted RBP12.52□□□□□ -0.4
TMEM170A-205ENST00000568559 CCDC121Q6ZUS5 278 aa12.52□□□□□ -0.4
TMEM170A-205ENST00000568559 CCDC149Q6ZUS6 474 aa12.52□□□□□ -0.4
TMEM170A-205ENST00000568559 RBM23Q86U06 439 aaKnown RBP12.52□□□□□ -0.4
TMEM170A-205ENST00000568559 LRRC19Q9H756 370 aa12.52□□□□□ -0.4
TMEM170A-205ENST00000568559 RAB21Q9UL25 225 aa12.52□□□□□ -0.4
TMEM170A-205ENST00000568559 CHMP2BQ9UQN3 213 aa12.52□□□□□ -0.4
TMEM170A-205ENST00000568559 STK38LQ9Y2H1 464 aa12.52□□□□□ -0.4
TMEM170A-205ENST00000568559 ARHGAP42A6NI28 874 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 LIASO43766 372 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 TSPAN3O60637 253 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 XPAP23025 273 aaPredicted RBP12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 FAAP100Q0VG06 881 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 LRRC14Q15048 493 aa12.52□□□□□ -0.41
TMEM170A-205ENST00000568559 RABGAP1LQ5R372 815 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms