RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 SPECC1L-ADORA2AF8WAN1 911 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 M0R296 226 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 DLL1O00548 723 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-208ENST00000567250 NRDCO43847 1150 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 ACSL4O60488 711 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 MOCS2O96007 188 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-208ENST00000567250 KLKB1P03952 638 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 RFC1P35251 1148 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-208ENST00000567250 EIF2DP41214 584 aaKnown RBP12.64□□□□□ -0.39
SF3B3-208ENST00000567250 ZNF143P52747 638 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-208ENST00000567250 STARD6P59095 220 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 MAMLD1Q13495 774 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 EIF4EBP2Q13542 120 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-208ENST00000567250 DHCR24Q15392 516 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 ASTE1Q2TB18 679 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-208ENST00000567250 ANO4Q32M45 955 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 ARL13BQ3SXY8 428 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 LY6G5CQ5SRR4 150 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 PPP1R15BQ5SWA1 713 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 ADGRF1Q5T601 910 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 ZNF852Q6ZMS4 543 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 PHLDB2Q86SQ0 1253 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 SUGP1Q8IWZ8 645 aaKnown RBP12.64□□□□□ -0.39
SF3B3-208ENST00000567250 FAM217AQ8IXS0 508 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 ADGRG2Q8IZP9 1017 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 ZNF557Q8N988 423 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-208ENST00000567250 JOSD2Q8TAC2 188 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 FNIP1Q8TF40 1166 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 RXFP2Q8WXD0 754 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 WBP2Q969T9 261 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 XPO6Q96QU8 1125 aaKnown RBP12.64□□□□□ -0.39
SF3B3-208ENST00000567250 TBCBQ99426 244 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 CHP1Q99653 195 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 NCAPGQ9BPX3 1015 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 C1QTNF1Q9BXJ1 281 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 WDCPQ9H6R7 721 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 MARK1Q9P0L2 795 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 MYO1AQ9UBC5 1043 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 LCMT1Q9UIC8 334 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 NENFQ9UMX5 172 aa12.64□□□□□ -0.39
SF3B3-208ENST00000567250 TECTAO75443 2155 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 KRBA1A5PL33 1030 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 KCNU1A8MYU2 1149 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 NCAM2O15394 837 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 HOXC11O43248 304 aaPredicted RBP12.63□□□□□ -0.39
SF3B3-208ENST00000567250 H2AFZP0C0S5 128 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 FECHP22830 423 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 GJA4P35212 333 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 GALCP54803 685 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 PITX1P78337 314 aaPredicted RBP12.63□□□□□ -0.39
SF3B3-208ENST00000567250 ATP11AP98196 1134 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 SPA17Q15506 151 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 CDO1Q16878 200 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 MPPE1Q53F39 396 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 ZC3H12AQ5D1E8 599 aaKnown RBP12.63□□□□□ -0.39
SF3B3-208ENST00000567250 OTUD1Q5VV17 481 aaPredicted RBP12.63□□□□□ -0.39
SF3B3-208ENST00000567250 H2AFVQ71UI9 128 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 BNIPLQ7Z465 357 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 CHSY1Q86X52 802 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 FAM172AQ8WUF8 416 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 FAM3CQ92520 227 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 NELL2Q99435 816 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 BAG1Q99933 345 aaPredicted RBP12.63□□□□□ -0.39
SF3B3-208ENST00000567250 CNPY3Q9BT09 278 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 BBS2Q9BXC9 721 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 THAP2Q9H0W7 228 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 LINC00597Q9H2U6 94 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 TBC1D17Q9HA65 648 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 PIGVQ9NUD9 493 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 SPTLC3Q9NUV7 552 aa12.63□□□□□ -0.39
SF3B3-208ENST00000567250 MYOFQ9NZM1 2061 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 KMT2EQ8IZD2 1858 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 KANSL1LA0AUZ9 987 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 NEDD8-MDP1E9PL57 170 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 F5H5T6 163 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 STK25O00506 426 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 CCP110O43303 1012 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 RNF8O76064 485 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 ENDOD1O94919 500 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 GJB6O95452 261 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 TMEM253P0C7T8 217 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 PSMA2P25787 234 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 CXCR3P49682 368 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 AIF1P55008 147 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 RPL7AP62424 266 aaKnown RBP12.62□□□□□ -0.39
SF3B3-208ENST00000567250 LRRC32Q14392 662 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 ACAP1Q15027 740 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 CCDC14Q49A88 953 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 RABGAP1LQ5R372 815 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 TTC39BQ5VTQ0 682 aaPredicted RBP12.62□□□□□ -0.39
SF3B3-208ENST00000567250 TRNP1Q6NT89 227 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 RHBDF2Q6PJF5 856 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 TPGS1Q6ZTW0 290 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 NUDT18Q6ZVK8 323 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 BMP8AQ7Z5Y6 402 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 CCDC117Q8IWD4 279 aaPredicted RBP12.62□□□□□ -0.39
SF3B3-208ENST00000567250 TXLNBQ8N3L3 684 aa12.62□□□□□ -0.39
SF3B3-208ENST00000567250 HJURPQ8NCD3 748 aaPredicted RBP12.62□□□□□ -0.39
SF3B3-208ENST00000567250 CCDC112Q8NEF3 446 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms