RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 WASHC5Q12768 1159 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 FRG1Q14331 258 aaKnown RBP9.61□□□□□ -0.87
BBS4-210ENST00000566400 PAFAH1B3Q15102 231 aaKnown RBP9.61□□□□□ -0.87
BBS4-210ENST00000566400 FAM110CQ1W6H9 321 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 TSNAXIP1Q2TAA8 658 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 GJC2Q5T442 439 aaPredicted RBP9.61□□□□□ -0.87
BBS4-210ENST00000566400 C6orf163Q5TEZ5 329 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 MOB2Q70IA6 237 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 PRPF39Q86UA1 669 aaKnown RBP9.61□□□□□ -0.87
BBS4-210ENST00000566400 ADGRF2Q8IZF7 708 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 SMC1BQ8NDV3 1235 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 FAM13CQ8NE31 585 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 RFWD2Q8NHY2 731 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 UTP4Q969X6 686 aaKnown RBP9.61□□□□□ -0.87
BBS4-210ENST00000566400 KCTD15Q96SI1 283 aaPredicted RBP9.61□□□□□ -0.87
BBS4-210ENST00000566400 LRRC4Q9HBW1 653 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 NMRK2Q9NPI5 230 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 SLC38A7Q9NVC3 462 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 SETD4Q9NVD3 440 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 IGSF9Q9P2J2 1179 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 STOML1Q9UBI4 398 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 TRIM33Q9UPN9 1127 aa9.61□□□□□ -0.87
BBS4-210ENST00000566400 CBX6O95503 412 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 METTL18O95568 372 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 RPLP2P05387 115 aaKnown RBP9.6□□□□□ -0.87
BBS4-210ENST00000566400 POLBP06746 335 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 BPGMP07738 259 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 SMIM10L2AP0DMW4 78 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 SMIM10L2BP0DMW5 78 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 MYL4P12829 197 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 NPR3P17342 541 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 GRK2P25098 689 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 HCAR3P49019 387 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 CPT1AP50416 773 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 CRYBB1P53674 252 aaPredicted RBP9.6□□□□□ -0.87
BBS4-210ENST00000566400 MRPS5P82675 430 aaKnown RBP9.6□□□□□ -0.87
BBS4-210ENST00000566400 GBE1Q04446 702 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 STX3Q13277 289 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 NBPF20Q3BBV1 942 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 ARL13BQ3SXY8 428 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 DNAL1Q4LDG9 190 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 PLEKHG4Q58EX7 1191 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 SPANXN3Q5MJ09 141 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 COL13A1Q5TAT6 717 aaPredicted RBP9.6□□□□□ -0.87
BBS4-210ENST00000566400 DLK2Q6UY11 383 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 TMPRSS6Q8IU80 811 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 NDUFAF2Q8N183 169 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 SIX6OS1Q8N1H7 587 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 TMEM86AQ8N2M4 240 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 COLGALT1Q8NBJ5 622 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 B3GALNT2Q8NCR0 500 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 STKLD1Q8NE28 680 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 PPP1R14CQ8TAE6 165 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 SLC2A14Q8TDB8 520 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 KBTBD7Q8WVZ9 684 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 PTPRN2Q92932 1015 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 NT5C3BQ969T7 300 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 NTAN1Q96AB6 310 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 C18orf25Q96B23 403 aaPredicted RBP9.6□□□□□ -0.87
BBS4-210ENST00000566400 PTCD3Q96EY7 689 aaKnown RBP9.6□□□□□ -0.87
BBS4-210ENST00000566400 VAT1Q99536 393 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 TRIM62Q9BVG3 475 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 EIF2AQ9BY44 585 aaKnown RBP9.6□□□□□ -0.87
BBS4-210ENST00000566400 ADAM33Q9BZ11 813 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 CXorf56Q9H5V9 222 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 MTMR10Q9NXD2 777 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 ADAM28Q9UKQ2 775 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 PIN4Q9Y237 131 aaKnown RBP9.6□□□□□ -0.87
BBS4-210ENST00000566400 Q9Y3F1 56 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 L3MBTL1Q9Y468 752 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 USP3Q9Y6I4 520 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 ZNF236Q9UL36 1845 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 CCL15-CCL14A0A0B4J2E2 113 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.6□□□□□ -0.87
BBS4-210ENST00000566400 MAGEB16A2A368 324 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 DIAPH2O60879 1101 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 F9P00740 461 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 MYL2P10916 166 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 MX2P20592 715 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 PAX3P23760 479 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 SERPINB3P29508 390 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 GCKP35557 465 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 GJA5P36382 358 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 CDK7P50613 346 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 CLNS1AP54105 237 aaKnown RBP9.6□□□□□ -0.87
BBS4-210ENST00000566400 OCRLQ01968 901 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 OVGP1Q12889 678 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 IFRD2Q12894 506 aaPredicted RBP9.6□□□□□ -0.87
BBS4-210ENST00000566400 CCL15Q16663 113 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 FAXCQ5TGI0 409 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 ZNF534Q76KX8 674 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 BNIPLQ7Z465 357 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.6□□□□□ -0.87
BBS4-210ENST00000566400 DEFB106AQ8N104 65 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 PPP4R1Q8TF05 950 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 RNF139Q8WU17 664 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 WNT8BQ93098 351 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 FAM149B1Q96BN6 582 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 NUDCD1Q96RS6 583 aa9.6□□□□□ -0.87
BBS4-210ENST00000566400 OSMRQ99650 979 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms