RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 P3H4Q92791 437 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 ZNF512Q96ME7 567 aaPredicted RBP14.8□□□□□ -0.04
COMMD4-205ENST00000562310 TGS1Q96RS0 853 aaKnown RBP14.8□□□□□ -0.04
COMMD4-205ENST00000562310 TKTL2Q9H0I9 626 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 OSBPL2Q9H1P3 480 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 ARFGAP3Q9NP61 516 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 TRPM5Q9NZQ8 1165 aa14.8□□□□□ -0.04
COMMD4-205ENST00000562310 CWC15Q9P013 229 aaKnown RBP14.8□□□□□ -0.04
COMMD4-205ENST00000562310 CFAP69A5D8W1 941 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 C2orf71A6NGG8 1288 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 NDC80O14777 642 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 TGM5O43548 720 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 TLR5O60602 858 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 CLUHO75153 1309 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 GLUD1P00367 558 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 GOT1P17174 413 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 PGFP49763 221 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 CLCN6P51797 869 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 TBX4P57082 545 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 TPI1P60174 286 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 MRPS25P82663 173 aaKnown RBP14.79□□□□□ -0.04
COMMD4-205ENST00000562310 NRG1Q02297 640 aaPredicted RBP14.79□□□□□ -0.04
COMMD4-205ENST00000562310 EFEMP1Q12805 493 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 SHHQ15465 462 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 OASLQ15646 514 aaKnown RBP14.79□□□□□ -0.04
COMMD4-205ENST00000562310 DUPD1Q68J44 220 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 CCNI2Q6ZMN8 369 aaPredicted RBP14.79□□□□□ -0.04
COMMD4-205ENST00000562310 RFX8Q6ZV50 586 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 PDZD4Q76G19 769 aaPredicted RBP14.79□□□□□ -0.04
COMMD4-205ENST00000562310 PLD5Q8N7P1 536 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 MRPL43Q8N983 215 aaKnown RBP14.79□□□□□ -0.04
COMMD4-205ENST00000562310 CCDC89Q8N998 374 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 POF1BQ8WVV4 589 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 PSMG2Q969U7 264 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 HAUS1Q96CS2 278 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 SLC39A13Q96H72 371 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 TRIM51Q9BSJ1 452 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 C17orf80Q9BSJ5 609 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 ALG13Q9NP73 1137 aaKnown RBP14.79□□□□□ -0.04
COMMD4-205ENST00000562310 ARHGEF4Q9NR80 690 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 MARCH2Q9P0N8 246 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 SFMBT1Q9UHJ3 866 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 SLC12A6Q9UHW9 1150 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 DNPEPQ9ULA0 475 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 ZNF148Q9UQR1 794 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 HBS1LQ9Y450 684 aaKnown RBP14.79□□□□□ -0.04
COMMD4-205ENST00000562310 RAD54BQ9Y620 910 aa14.79□□□□□ -0.04
COMMD4-205ENST00000562310 ANAPC1Q9H1A4 1944 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 ZNF840PA6NDX5 716 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 DAPK3O43293 454 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 MSI1O43347 362 aaKnown RBP14.78□□□□□ -0.04
COMMD4-205ENST00000562310 LRG1P02750 347 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 PECAM1P16284 738 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-205ENST00000562310 KLRC2P26717 231 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 KCNJ1P48048 391 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 EIF3EP60228 445 aaKnown RBP14.78□□□□□ -0.04
COMMD4-205ENST00000562310 ERVFC1P60507 584 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 ERVK-21P61565 698 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 XRCC4Q13426 336 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 DPYSQ14117 519 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 PABPC1LQ4VXU2 614 aaKnown RBP14.78□□□□□ -0.04
COMMD4-205ENST00000562310 HECTD3Q5T447 861 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 PLPP4Q5VZY2 271 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 EMBQ6PCB8 327 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 LILRA6Q6PI73 481 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 GSTA5Q7RTV2 222 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 CDKL3Q8IVW4 592 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-205ENST00000562310 PYROXD2Q8N2H3 581 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 ELMOD1Q8N336 334 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 ALLCQ8N6M5 410 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 ATP6V0D2Q8N8Y2 350 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 CASKIN2Q8WXE0 1202 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 FCRL2Q96LA5 508 aaPredicted RBP14.78□□□□□ -0.04
COMMD4-205ENST00000562310 DNMT3LQ9UJW3 386 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 DENND4CQ5VZ89 1909 aa14.78□□□□□ -0.04
COMMD4-205ENST00000562310 ZSCAN5CA6NGD5 496 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-205ENST00000562310 KCNU1A8MYU2 1149 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 FGF10O15520 208 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-205ENST00000562310 CREB3O43889 395 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 ZMYND10O75800 440 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 IGLV3-27P01718 113 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 CA3P07451 260 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 SERPINB6P35237 376 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 ATP5C1P36542 298 aaKnown RBP14.77□□□□□ -0.05
COMMD4-205ENST00000562310 RAB30Q15771 203 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 NUGGCQ68CJ6 796 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 NCBP2-AS2Q69YL0 99 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 ELMSAN1Q6PJG2 1045 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 DNAJB7Q7Z6W7 309 aaPredicted RBP14.77□□□□□ -0.05
COMMD4-205ENST00000562310 KREMEN2Q8NCW0 462 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 BBOF1Q8ND07 529 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 C1orf74Q96LT6 269 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 NACA2Q9H009 215 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 PCDH9Q9HC56 1237 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 ANLNQ9NQW6 1124 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 OR12D3Q9UGF7 316 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 ASIC3Q9UHC3 531 aa14.77□□□□□ -0.05
COMMD4-205ENST00000562310 SLC12A8A0AV02 714 aa14.76□□□□□ -0.05
COMMD4-205ENST00000562310 ESYT3A0FGR9 886 aa14.76□□□□□ -0.05
COMMD4-205ENST00000562310 HACD1B0YJ81 288 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms