RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CYTH4Q9UIA0 394 aa17.93■□□□□ 0.46
CDC42BPB-208ENST00000561271 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 GTPBP10A4D1E9 387 aaKnown RBP17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 WASH3PC4AMC7 463 aa17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 E5RJQ4 531 aa17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 MED7O43513 233 aa17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 CAVIN2O95810 425 aa17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 FYNP06241 537 aa17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 NCAM1P13591 858 aa17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 RPL34P49207 117 aaKnown RBP17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 MPPE1Q53F39 396 aa17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 SCUBE3Q8IX30 993 aa17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 TMEFF1Q8IYR6 380 aa17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 DQX1Q8TE96 717 aaKnown RBP17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 SHC3Q92529 594 aa17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 CD93Q9NPY3 652 aa17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 LMBRD1Q9NUN5 540 aa17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 STON1Q9Y6Q2 735 aa17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 ATXN2Q99700 1313 aaKnown RBP17.92■□□□□ 0.46
CDC42BPB-208ENST00000561271 TPRP12270 2363 aaKnown RBP17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 PLXNA2O75051 1894 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 GFRA2O00451 464 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 PAPSS1O43252 624 aaPredicted RBP17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 MAP3K13O43283 966 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 LATS1O95835 1130 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 PNMA6AP0CW24 399 aaPredicted RBP17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 PRKCSHP14314 528 aaPredicted RBP17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 IL12RB1P42701 662 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 TBX4P57082 545 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 PDCLQ13371 301 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 MEA1Q16626 185 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 ADGRF1Q5T601 910 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 RFWD3Q6PCD5 774 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 LPCAT2Q7L5N7 544 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 PASD1Q8IV76 773 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 FAM114A1Q8IWE2 563 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 ADAM32Q8TC27 787 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 SORCS1Q8WY21 1168 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 FAM81BQ96LP2 452 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 SLC4A5Q9BY07 1137 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 CIPCQ9C0C6 399 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 TJP2Q9UDY2 1190 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 DACH1Q9UI36 760 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 STOML2Q9UJZ1 356 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 NAALADL1Q9UQQ1 740 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 DOCK9Q9BZ29 2069 aa17.91■□□□□ 0.46
CDC42BPB-208ENST00000561271 GOLGA6L7A0A1B0GV03 622 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 PATE3B3GLJ2 98 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 SART1O43290 800 aaKnown RBP17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 HLA-FP30511 346 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 SLC6A4P31645 630 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 PTGER3P43115 390 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 ACADSBP45954 432 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 ZNF445P59923 1031 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 FAM133BQ5BKY9 247 aaKnown RBP17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 MIIPQ5JXC2 388 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 NUGGCQ68CJ6 796 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 TMEM215Q68D42 235 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 KIAA1324Q6UXG2 1013 aaKnown RBP17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 CLEC17AQ6ZS10 378 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 TAC4Q86UU9 113 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 UCMAQ8WVF2 138 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 PIGKQ92643 395 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 FCRL2Q96LA5 508 aaPredicted RBP17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 SERPINB11Q96P15 392 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 EDEM2Q9BV94 578 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 SLC2A11Q9BYW1 496 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 THAP10Q9P2Z0 257 aaPredicted RBP17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 CYP8B1Q9UNU6 501 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 PCNX2A6NKB5 2137 aa17.9■□□□□ 0.46
CDC42BPB-208ENST00000561271 LNP1A1A4G5 178 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 ZBTB24O43167 697 aaPredicted RBP17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 KCNA4P22459 653 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 PRKCHP24723 683 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 ERCC5P28715 1186 aaPredicted RBP17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 LIMK1P53667 647 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 RPL6Q02878 288 aaKnown RBP17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 RING1Q06587 406 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 BYSLQ13895 437 aaKnown RBP17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 ZNF234Q14588 700 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 STARD3Q14849 445 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 EIF4HQ15056 248 aaKnown RBP17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 FUT11Q495W5 492 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 STPG1Q5TH74 334 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 SYPL2Q5VXT5 272 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 NADSYN1Q6IA69 706 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 CACUL1Q86Y37 369 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 DEFB119Q8N690 84 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 WFDC5Q8TCV5 224 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 STK32AQ8WU08 396 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 TMA16Q96EY4 203 aaKnown RBP17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 MRGPRX1Q96LB2 322 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 PRICKLE1Q96MT3 831 aaPredicted RBP17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 TUBGCP2Q9BSJ2 902 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 NDST4Q9H3R1 872 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 ELOVL2Q9NXB9 296 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 DNAJC12Q9UKB3 198 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 KNL1Q8NG31 2342 aa17.89■□□□□ 0.45
CDC42BPB-208ENST00000561271 IGHV1OR15-9A0A0B4J2B8 117 aa17.88■□□□□ 0.45
CDC42BPB-208ENST00000561271 KCNJ18B7U540 433 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms