RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 CYP3A5P20815 502 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 AMPD1P23109 780 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 OR1E1P30953 314 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 OXCT1P55809 520 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 CREMQ03060 361 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 CUL3Q13618 768 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 POLD3Q15054 466 aaPredicted RBP10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 RPS6KA2Q15349 733 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 TIGD5Q53EQ6 642 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 VARS2Q5ST30 1063 aaKnown RBP10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 CNKSR3Q6P9H4 555 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 FAM183BPQ6ZVS7 135 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 PIP4K2CQ8TBX8 421 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 LRRC15Q8TF66 581 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 EXT2Q93063 718 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 TTC17Q96AE7 1141 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 C9orf72Q96LT7 481 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 PFDN4Q9NQP4 134 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 GNEQ9Y223 722 aaKnown RBP10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 MYBPHLA2RUH7 354 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 NRP1O14786 923 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 RARGP13631 454 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 GABRR2P28476 465 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 STIP1P31948 543 aaKnown RBP10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 NOMO3P69849 1222 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 KCNT2Q6UVM3 1135 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 PRSS55Q6UWB4 352 aaPredicted RBP10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 SPOCD1Q6ZMY3 1216 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 JAMLQ86YT9 394 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 TEX9Q8N6V9 391 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 EXD1Q8NHP7 514 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 B3GALT6Q96L58 329 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 FAM161BQ96MY7 647 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 GJD2Q9UKL4 321 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 SIGLEC16A6NMB1 481 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 CILPO75339 1184 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 ARHGEF7Q14155 803 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 AGGF1Q8N302 714 aaeCLIP10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 LNX1Q8TBB1 728 aaPredicted RBP10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 TEKT4Q8WW24 435 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 TLR10Q9BXR5 811 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 INSL6Q9Y581 213 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 IQANK1A0A1B0GTG1 560 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 TLR5O60602 858 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 KRT38O76015 456 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 UBOX5O94941 541 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 PIGRP01833 764 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 RPL7AP62424 266 aaKnown RBP10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 TAF10Q12962 218 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 UBR3Q6ZT12 1888 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 NAV1Q8NEY1 1877 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 CEP70Q8NHQ1 597 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 RBM15Q96T37 977 aaKnown RBP eCLIP10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 TBCBQ99426 244 aa10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 TSR3Q9UJK0 312 aaKnown RBP10.98□□□□□ -0.65
CARMIL3-202ENST00000559694 COL24A1Q17RW2 1714 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 RAMP2O60895 175 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 COILP38432 576 aaPredicted RBP10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 AMPD2Q01433 879 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 FAM187BQ17R55 369 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 NXNQ6DKJ4 435 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 YTHDF3Q7Z739 585 aaKnown RBP10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 ATP11CQ8NB49 1132 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 HDAC11Q96DB2 347 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 ATXN7L3BQ96GX2 97 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 TRAIPQ9BWF2 469 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 ADAM33Q9BZ11 813 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 GPR63Q9BZJ6 419 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 VPS11Q9H270 941 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 PABPC3Q9H361 631 aaKnown RBP10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 APOBEC3GQ9HC16 384 aaKnown RBP10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 XPO7Q9UIA9 1087 aaKnown RBP10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 NVLO15381 856 aaKnown RBP10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 ZNF189O75820 626 aaPredicted RBP10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 LMO2P25791 158 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 TKTP29401 623 aaKnown RBP10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 SMAD3P84022 425 aaKnown RBP10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 MAMLD1Q13495 774 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 C1orf146Q5VVC0 180 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 MFSD7Q6UXD7 560 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 PDZD8Q8NEN9 1154 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 SPDYE1Q8NFV5 336 aaPredicted RBP10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 RSPH1Q8WYR4 309 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 FAM53CQ9NYF3 392 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 ZFATQ9P243 1243 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 STXBP5LQ9Y2K9 1186 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 SLC30A1Q9Y6M5 507 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 PRRC2BQ5JSZ5 2229 aaKnown RBP10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 E5RI56 91 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 O00370 1275 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 ARFIP2P53365 341 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 ITIH4Q14624 930 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 SLC39A4Q6P5W5 647 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 RAB44Q7Z6P3 723 aaPredicted RBP10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 ZNF516Q92618 1163 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 KAT2BQ92831 832 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 TCF25Q9BQ70 676 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 FAM129AQ9BZQ8 928 aa10.97□□□□□ -0.65
CARMIL3-202ENST00000559694 THEGQ9P2T0 379 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms