RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 C12orf50Q8NA57 414 aaPredicted RBP13.11□□□□□ -0.31
LRRC28-214ENST00000559433 C1orf131Q8NDD1 294 aaKnown RBP13.11□□□□□ -0.31
LRRC28-214ENST00000559433 DQX1Q8TE96 717 aaKnown RBP13.11□□□□□ -0.31
LRRC28-214ENST00000559433 HMGB4Q8WW32 186 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 RMDN1Q96DB5 314 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 PPP1R13BQ96KQ4 1090 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 SERPINB11Q96P15 392 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 NOX5Q96PH1 765 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 CPXM1Q96SM3 734 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 ARRDC1-AS1Q9H2J1 176 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 SEMA4GQ9NTN9 838 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 FANCLQ9NW38 375 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 TJP2Q9UDY2 1190 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 FBXO10Q9UK96 956 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 HCN2Q9UL51 889 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 INVSQ9Y283 1065 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 SLC27A6Q9Y2P4 619 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 CEP83Q9Y592 693 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 SDK1Q7Z5N4 2213 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 RIOK3O14730 519 aaKnown RBP13.1□□□□□ -0.31
LRRC28-214ENST00000559433 DCLK1O15075 740 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 UCHL3P15374 230 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 HOXD9P28356 352 aaPredicted RBP13.1□□□□□ -0.31
LRRC28-214ENST00000559433 NTSR1P30989 418 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 SLC11A2P49281 568 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 ZNF445P59923 1031 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 YWHAZP63104 245 aaKnown RBP13.1□□□□□ -0.31
LRRC28-214ENST00000559433 ARID5AQ03989 594 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 FKBP15Q5T1M5 1219 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 BEND5Q7L4P6 421 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 ERMP1Q7Z2K6 904 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 ANKS1BQ7Z6G8 1248 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 WDTC1Q8N5D0 677 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 ANKRD20A12PQ8NF67 263 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 ADAM32Q8TC27 787 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 UCMAQ8WVF2 138 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 ZC3H10Q96K80 434 aaKnown RBP13.1□□□□□ -0.31
LRRC28-214ENST00000559433 SPACA7Q96KW9 195 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 FCRL2Q96LA5 508 aaPredicted RBP13.1□□□□□ -0.31
LRRC28-214ENST00000559433 ACOX2Q99424 681 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 NAA15Q9BXJ9 866 aaKnown RBP13.1□□□□□ -0.31
LRRC28-214ENST00000559433 SLC2A11Q9BYW1 496 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 LHX5Q9H2C1 402 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 PDCL3Q9H2J4 239 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 SYNCQ9H7C4 482 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 POPDC2Q9HBU9 364 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 PARD6AQ9NPB6 346 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 PLCB1Q9NQ66 1216 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 STOML2Q9UJZ1 356 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 TLR6Q9Y2C9 796 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 NUP205Q92621 2012 aa13.1□□□□□ -0.31
LRRC28-214ENST00000559433 CEP192Q8TEP8 1941 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 GOLGA6L7A0A1B0GV03 622 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 ACSL4O60488 711 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 EPN2O95208 641 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 SNX16P57768 344 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 TYRO3Q06418 890 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 NNTQ13423 1086 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 GEN1Q17RS7 908 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 PLK5Q496M5 336 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 AASDHQ4L235 1098 aaPredicted RBP13.09□□□□□ -0.31
LRRC28-214ENST00000559433 SYPL2Q5VXT5 272 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 RFWD3Q6PCD5 774 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 IPO4Q8TEX9 1081 aaKnown RBP13.09□□□□□ -0.31
LRRC28-214ENST00000559433 ERLEC1Q96DZ1 483 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 TMA16Q96EY4 203 aaKnown RBP13.09□□□□□ -0.31
LRRC28-214ENST00000559433 PIWIL1Q96J94 861 aaKnown RBP13.09□□□□□ -0.31
LRRC28-214ENST00000559433 CACNA2D2Q9NY47 1150 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 TMEM63CQ9P1W3 806 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 CLEC4EQ9ULY5 219 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 PCDHGA5Q9Y5G8 931 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 ABCA7Q8IZY2 2146 aa13.09□□□□□ -0.31
LRRC28-214ENST00000559433 CEP250Q9BV73 2442 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 MUC22E2RYF6 1773 aaPredicted RBP13.08□□□□□ -0.32
LRRC28-214ENST00000559433 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.08□□□□□ -0.32
LRRC28-214ENST00000559433 F8VZ95 297 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 GFRA2O00451 464 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 HSF2BPO75031 334 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 TRUB2O95900 331 aaKnown RBP13.08□□□□□ -0.32
LRRC28-214ENST00000559433 MOCS2O96007 188 aaPredicted RBP13.08□□□□□ -0.32
LRRC28-214ENST00000559433 APOEP02649 317 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 ERBB2P04626 1255 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 CYP11B1P15538 503 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 TGM1P22735 817 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 SLC6A4P31645 630 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 KLK7P49862 253 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 SGSHP51688 502 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 COPB1P53618 953 aaKnown RBP13.08□□□□□ -0.32
LRRC28-214ENST00000559433 CREB5Q02930 508 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 TAF5Q15542 800 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 DCAF6Q58WW2 860 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 FAM133BQ5BKY9 247 aaKnown RBP13.08□□□□□ -0.32
LRRC28-214ENST00000559433 TAF3Q5VWG9 929 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 OR6B2Q6IFH4 312 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 PRR23CQ6ZRP0 262 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 FAM183BPQ6ZVS7 135 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 LPCAT2Q7L5N7 544 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 CCDC117Q8IWD4 279 aaPredicted RBP13.08□□□□□ -0.32
LRRC28-214ENST00000559433 AZIN2Q96A70 460 aa13.08□□□□□ -0.32
LRRC28-214ENST00000559433 GABRG3Q99928 467 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms