RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 PSMA2P25787 234 aa22.51■■□□□ 1.19
SNX1-206ENST00000559389 MAGEA1P43355 309 aa22.51■■□□□ 1.19
SNX1-206ENST00000559389 SLC11A2P49281 568 aa22.51■■□□□ 1.19
SNX1-206ENST00000559389 ITPRIPL2Q3MIP1 535 aa22.51■■□□□ 1.19
SNX1-206ENST00000559389 RAB6CQ53S08 254 aa22.51■■□□□ 1.19
SNX1-206ENST00000559389 SND1Q7KZF4 910 aaKnown RBP eCLIP22.51■■□□□ 1.19
SNX1-206ENST00000559389 LRRC8AQ8IWT6 810 aa22.51■■□□□ 1.19
SNX1-206ENST00000559389 BTN2A3PQ96KV6 586 aa22.51■■□□□ 1.19
SNX1-206ENST00000559389 RAB6CQ9H0N0 254 aa22.51■■□□□ 1.19
SNX1-206ENST00000559389 ECT2Q9H8V3 914 aa22.51■■□□□ 1.19
SNX1-206ENST00000559389 LUC7LQ9NQ29 371 aaKnown RBP22.51■■□□□ 1.19
SNX1-206ENST00000559389 ARHGEF38Q9NXL2 777 aa22.51■■□□□ 1.19
SNX1-206ENST00000559389 XPO7Q9UIA9 1087 aaKnown RBP22.51■■□□□ 1.19
SNX1-206ENST00000559389 ANAPC7Q9UJX3 599 aa22.51■■□□□ 1.19
SNX1-206ENST00000559389 PCDHA13Q9Y5I0 950 aa22.51■■□□□ 1.19
SNX1-206ENST00000559389 GFRA2O00451 464 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 ACSL4O60488 711 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 DESP17661 470 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 VCPP55072 806 aaKnown RBP22.5■■□□□ 1.19
SNX1-206ENST00000559389 MTA1Q13330 715 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 DHCR24Q15392 516 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 FAM133BQ5BKY9 247 aaKnown RBP22.5■■□□□ 1.19
SNX1-206ENST00000559389 IER5LQ5T953 404 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 NADSYN1Q6IA69 706 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 FAM131BQ86XD5 332 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 ADGRG2Q8IZP9 1017 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 ATP6V0D2Q8N8Y2 350 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 ZNF564Q8TBZ8 553 aaPredicted RBP22.5■■□□□ 1.19
SNX1-206ENST00000559389 RFFLQ8WZ73 363 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 EDAQ92838 391 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 RNF34Q969K3 372 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 ANLNQ9NQW6 1124 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 ARHGEF3Q9NR81 526 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 SPHK2Q9NRA0 654 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 HEBP1Q9NRV9 189 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 CTTNBP2NLQ9P2B4 639 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 WNT16Q9UBV4 365 aa22.5■■□□□ 1.19
SNX1-206ENST00000559389 I6L893 689 aaPredicted RBP22.49■■□□□ 1.19
SNX1-206ENST00000559389 HOXC11O43248 304 aaPredicted RBP22.49■■□□□ 1.19
SNX1-206ENST00000559389 ADH1CP00326 375 aa22.49■■□□□ 1.19
SNX1-206ENST00000559389 CHKAP35790 457 aa22.49■■□□□ 1.19
SNX1-206ENST00000559389 CCZ1BP86790 482 aa22.49■■□□□ 1.19
SNX1-206ENST00000559389 CCZ1P86791 482 aaPredicted RBP22.49■■□□□ 1.19
SNX1-206ENST00000559389 SIGLEC14Q08ET2 396 aa22.49■■□□□ 1.19
SNX1-206ENST00000559389 GAB4Q2WGN9 574 aa22.49■■□□□ 1.19
SNX1-206ENST00000559389 LY6G5CQ5SRR4 150 aa22.49■■□□□ 1.19
SNX1-206ENST00000559389 ADGRF1Q5T601 910 aa22.49■■□□□ 1.19
SNX1-206ENST00000559389 RHBDF2Q6PJF5 856 aa22.49■■□□□ 1.19
SNX1-206ENST00000559389 ACRBPQ8NEB7 543 aa22.49■■□□□ 1.19
SNX1-206ENST00000559389 WDCPQ9H6R7 721 aa22.49■■□□□ 1.19
SNX1-206ENST00000559389 MARK1Q9P0L2 795 aa22.49■■□□□ 1.19
SNX1-206ENST00000559389 KIAA1549LQ6ZVL6 1849 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 ARHGAP6O43182 974 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 MTA2O94776 668 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 ADH5P11766 374 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 ALADP13716 330 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 SLC6A4P31645 630 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 MLLT6P55198 1093 aaPredicted RBP22.48■■□□□ 1.19
SNX1-206ENST00000559389 TCEAL1Q15170 157 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 MLF2Q15773 248 aaPredicted RBP22.48■■□□□ 1.19
SNX1-206ENST00000559389 RHOT2Q8IXI1 618 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 NIPA2Q8N8Q9 360 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 TTC8Q8TAM2 541 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 CHFRQ96EP1 664 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 MSANTD3Q96H12 275 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 PRICKLE1Q96MT3 831 aaPredicted RBP22.48■■□□□ 1.19
SNX1-206ENST00000559389 TKTL2Q9H0I9 626 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 OSGEPQ9NPF4 335 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 SLC12A6Q9UHW9 1150 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 FBXL21Q9UKT6 434 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 CA14Q9ULX7 337 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 PIAS3Q9Y6X2 628 aa22.48■■□□□ 1.19
SNX1-206ENST00000559389 PI4K2BG5E9Z4 385 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 TNFRSF10AO00220 468 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 GLULP15104 373 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 CTHP32929 405 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 SOX9P48436 509 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 NR1H3Q13133 447 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 SLC44A4Q53GD3 710 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 MS4A13Q5J8X5 152 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 PIK3R6Q5UE93 754 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 CHSY1Q86X52 802 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 TMEM25Q86YD3 366 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 NTAN1Q96AB6 310 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 P2RY11Q96G91 374 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 BTBD6Q96KE9 485 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 PRMT1Q99873 361 aaKnown RBP22.47■■□□□ 1.19
SNX1-206ENST00000559389 DDX50Q9BQ39 737 aaKnown RBP22.47■■□□□ 1.19
SNX1-206ENST00000559389 DESI2Q9BSY9 194 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 C8orf33Q9H7E9 229 aaPredicted RBP22.47■■□□□ 1.19
SNX1-206ENST00000559389 IP6K2Q9UHH9 426 aa22.47■■□□□ 1.19
SNX1-206ENST00000559389 GOLGA6L7A0A1B0GV03 622 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 KRBA1A5PL33 1030 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 SHISA7A6NL88 538 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 SPECC1L-ADORA2AF8WAN1 911 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 PAGE1O75459 146 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 PENKP01210 267 aaPredicted RBP22.46■■□□□ 1.19
SNX1-206ENST00000559389 GJA4P35212 333 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 VAV2P52735 878 aa22.46■■□□□ 1.19
SNX1-206ENST00000559389 PRKCQQ04759 706 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms