RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 KIAA1549LQ6ZVL6 1849 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 MACROD2A1Z1Q3 448 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 TNNT1P13805 278 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 TCF4P15884 667 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 DESP17661 470 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 CCR1P32246 355 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 HDAC4P56524 1084 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 NUGGCQ68CJ6 796 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 TPGS1Q6ZTW0 290 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 ARCQ7LC44 396 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 GJD3Q8N144 294 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 SLC44A3Q8N4M1 653 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 CCDC185Q8N715 623 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 NT5C3BQ969T7 300 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 E2F7Q96AV8 911 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 CNPY3Q9BT09 278 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 TKTL2Q9H0I9 626 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 SIK2Q9H0K1 926 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 WDCPQ9H6R7 721 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 GPATCH2LQ9NWQ4 482 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 GTSE1Q9NYZ3 720 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 IGSF9Q9P2J2 1179 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 UVRAGQ9P2Y5 699 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 MUTYHQ9UIF7 546 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 SALL4Q9UJQ4 1053 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 AGO1Q9UL18 857 aaKnown RBP12.91□□□□□ -0.34
GABPB1-208ENST00000558970 INTUQ9ULD6 942 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 HYOU1Q9Y4L1 999 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 ADGRG1Q9Y653 693 aa12.91□□□□□ -0.34
GABPB1-208ENST00000558970 E2F8A0AVK6 867 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 C19orf67A6NJJ6 358 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 MYO1FO00160 1098 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 GREM1O60565 184 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 RNF8O76064 485 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 IGLV3-27P01718 113 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 CCDC175P0C221 793 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 WEE1P30291 646 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 KPNA1P52294 538 aaPredicted RBP12.9□□□□□ -0.34
GABPB1-208ENST00000558970 TDGQ13569 410 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 RAP1GAP2Q684P5 730 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 RFWD3Q6PCD5 774 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 CHSY1Q86X52 802 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 UNC45BQ8IWX7 931 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 RHOT2Q8IXI1 618 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 DEPDC1BQ8WUY9 529 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 OSCP1Q8WVF1 389 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 SLC39A13Q96H72 371 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 MAGEB5Q9BZ81 275 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 ZWILCHQ9H900 591 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 C11orf16Q9NQ32 467 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 LZTFL1Q9NQ48 299 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 ANLNQ9NQW6 1124 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.9□□□□□ -0.347e-7■■□□□ 14.1
GABPB1-208ENST00000558970 OBP2AQ9NY56 170 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 PLK2Q9NYY3 685 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 IP6K2Q9UHH9 426 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 PAXBP1Q9Y5B6 917 aa12.9□□□□□ -0.34
GABPB1-208ENST00000558970 I6L893 689 aaPredicted RBP12.89□□□□□ -0.35
GABPB1-208ENST00000558970 ACSL4O60488 711 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 PAGE1O75459 146 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 MOCS3O95396 460 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 F9P00740 461 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 SLC6A4P31645 630 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 SOX9P48436 509 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 SLC11A2P49281 568 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 CXCR3P49682 368 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 RING1Q06587 406 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 FCHO2Q0JRZ9 810 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 KIF5AQ12840 1032 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 NNTQ13423 1086 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 SMTNL2Q2TAL5 461 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 ANO4Q32M45 955 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 EML3Q32P44 896 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 ARHGAP29Q52LW3 1261 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 IER5LQ5T953 404 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 NADSYN1Q6IA69 706 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 Q6ZNB5 142 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 HTR3DQ70Z44 454 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 STRADAQ7RTN6 431 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 ARFGAP1Q8N6T3 406 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 ATP6V0D2Q8N8Y2 350 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 CSGALNACT1Q8TDX6 532 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 PGAP3Q96FM1 320 aaPredicted RBP12.89□□□□□ -0.35
GABPB1-208ENST00000558970 PEBP4Q96S96 227 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 DCLK3Q9C098 648 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 HPS4Q9NQG7 708 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 KLHL11Q9NVR0 708 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 SLC12A6Q9UHW9 1150 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 CA14Q9ULX7 337 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 GUCA1BQ9UMX6 200 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 SORCS3Q9UPU3 1222 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 PPP2R2CQ9Y2T4 447 aa12.89□□□□□ -0.35
GABPB1-208ENST00000558970 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.89□□□□□ -0.35
GABPB1-208ENST00000558970 OTOL1A6NHN0 477 aaPredicted RBP12.88□□□□□ -0.35
GABPB1-208ENST00000558970 KCNU1A8MYU2 1149 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 PRR33A8MZF0 331 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 NEDD8-MDP1E9PL57 170 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 CHADO15335 359 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 PRPSAP2O60256 369 aa12.88□□□□□ -0.35
GABPB1-208ENST00000558970 SRGAP2O75044 1071 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms