RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CYB5D2Q8WUJ1 264 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 IRGQQ8WZA9 623 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 SHC3Q92529 594 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 PIGKQ92643 395 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 TMA16Q96EY4 203 aaKnown RBP13.04□□□□□ -0.32
SMAD3-208ENST00000558827 ZC3H10Q96K80 434 aaKnown RBP13.04□□□□□ -0.32
SMAD3-208ENST00000558827 GBP4Q96PP9 640 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 SLC4A5Q9BY07 1137 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 CALCOCO1Q9P1Z2 691 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 DACH1Q9UI36 760 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 XPO7Q9UIA9 1087 aaKnown RBP13.04□□□□□ -0.32
SMAD3-208ENST00000558827 FBXO10Q9UK96 956 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 STARD13Q9Y3M8 1113 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 NFE2L3Q9Y4A8 694 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 FHOD1Q9Y613 1164 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 STON1Q9Y6Q2 735 aa13.04□□□□□ -0.32
SMAD3-208ENST00000558827 CNOT1A5YKK6 2376 aaKnown RBP13.04□□□□□ -0.32
SMAD3-208ENST00000558827 DCHS1Q96JQ0 3298 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 MED19A0JLT2 244 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-208ENST00000558827 PATE3B3GLJ2 98 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 CAPN9O14815 690 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 FBXO21O94952 628 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 HLA-EP13747 358 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 NDUFV2P19404 249 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 HOXD9P28356 352 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-208ENST00000558827 CLCN1P35523 988 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 P2RY2P41231 377 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 IL12RB1P42701 662 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 DRAP1Q14919 205 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-208ENST00000558827 MAP7D1Q3KQU3 841 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 MPPE1Q53F39 396 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 ZC3H12AQ5D1E8 599 aaKnown RBP13.03□□□□□ -0.32
SMAD3-208ENST00000558827 ADGRF1Q5T601 910 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 TMEM215Q68D42 235 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 NADSYN1Q6IA69 706 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 OR6B2Q6IFH4 312 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 DPY19L2P1Q6NXN4 242 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 CLEC17AQ6ZS10 378 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 C11orf57Q6ZUT1 292 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-208ENST00000558827 TRMT11Q7Z4G4 463 aaKnown RBP13.03□□□□□ -0.32
SMAD3-208ENST00000558827 CFAP52Q8N1V2 620 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 SCML4Q8N228 414 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 CPXM2Q8N436 756 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 C12orf50Q8NA57 414 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-208ENST00000558827 C1orf131Q8NDD1 294 aaKnown RBP13.03□□□□□ -0.32
SMAD3-208ENST00000558827 OLIG1Q8TAK6 271 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 WFDC5Q8TCV5 224 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 FCRL2Q96LA5 508 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-208ENST00000558827 CPXM1Q96SM3 734 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 DLL3Q9NYJ7 618 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 CYP8B1Q9UNU6 501 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 ATXN2Q99700 1313 aaKnown RBP13.03□□□□□ -0.32
SMAD3-208ENST00000558827 NCOR2Q9Y618 2525 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 NUP205Q92621 2012 aa13.03□□□□□ -0.32
SMAD3-208ENST00000558827 GTPBP10A4D1E9 387 aaKnown RBP13.02□□□□□ -0.33
SMAD3-208ENST00000558827 PRR5-ARHGAP8B1AHC4 643 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 ACSL4O60488 711 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 CAVIN2O95810 425 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 PTGER3P43115 390 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 ACADSBP45954 432 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 RPS24P62847 133 aaKnown RBP13.02□□□□□ -0.33
SMAD3-208ENST00000558827 ARHGAP8P85298 464 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 PTK2Q05397 1052 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 PDCLQ13371 301 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 HSF5Q4G112 596 aaPredicted RBP13.02□□□□□ -0.33
SMAD3-208ENST00000558827 FAM133BQ5BKY9 247 aaKnown RBP13.02□□□□□ -0.33
SMAD3-208ENST00000558827 TCP11X2Q5H9J9 407 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 PMS2CLQ68D20 193 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 ANKS1BQ7Z6G8 1248 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 FAM217AQ8IXS0 508 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 DEFB106AQ8N104 65 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 LOXL4Q96JB6 756 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 PPP1R13BQ96KQ4 1090 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 NUCKS1Q9H1E3 243 aaKnown RBP13.02□□□□□ -0.33
SMAD3-208ENST00000558827 PDCL3Q9H2J4 239 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 FSCN3Q9NQT6 498 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 ABCB8Q9NUT2 735 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 ELOVL2Q9NXB9 296 aa13.02□□□□□ -0.33
SMAD3-208ENST00000558827 BCLAF3A2AJT9 711 aaKnown RBP13.01□□□□□ -0.33
SMAD3-208ENST00000558827 ZBTB24O43167 697 aaPredicted RBP13.01□□□□□ -0.33
SMAD3-208ENST00000558827 LRP3O75074 770 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 ERBB2P04626 1255 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 ZNF806P0C7X5 589 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 PRKCHP24723 683 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 HLA-FP30511 346 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 CD70P32970 193 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 KRT9P35527 623 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 RPL34P49207 117 aaKnown RBP13.01□□□□□ -0.33
SMAD3-208ENST00000558827 SLC11A2P49281 568 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 RNASE9P60153 205 aaKnown RBP13.01□□□□□ -0.33
SMAD3-208ENST00000558827 ARID5AQ03989 594 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 ZNF234Q14588 700 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 C2CD6Q53TS8 623 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 DCAF6Q58WW2 860 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 PIK3R6Q5UE93 754 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 KLHDC7AQ5VTJ3 777 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 RAP1GAP2Q684P5 730 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 SASS6Q6UVJ0 657 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 MMS22LQ6ZRQ5 1243 aa13.01□□□□□ -0.33
SMAD3-208ENST00000558827 FAM183BPQ6ZVS7 135 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms