RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 IPO4Q8TEX9 1081 aaKnown RBP12.02□□□□□ -0.49
SLIRP-205ENST00000556310 DDX1Q92499 740 aaKnown RBP12.02□□□□□ -0.49
SLIRP-205ENST00000556310 PIWIL1Q96J94 861 aaKnown RBP12.02□□□□□ -0.49
SLIRP-205ENST00000556310 SPAG5Q96R06 1193 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 PDCL3Q9H2J4 239 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 KDM4CQ9H3R0 1056 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 POPDC2Q9HBU9 364 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 ASNSD1Q9NWL6 643 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 STOML2Q9UJZ1 356 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 MMP17Q9ULZ9 603 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 SLC8A2Q9UPR5 921 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 VPS9D1Q9Y2B5 631 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 GPR179Q6PRD1 2367 aa12.02□□□□□ -0.49
SLIRP-205ENST00000556310 EP300Q09472 2414 aaPredicted RBP12.02□□□□□ -0.49
SLIRP-205ENST00000556310 CCDC163A0A0D9SF12 145 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 TBC1D3BA6NDS4 549 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 CAPN9O14815 690 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 HSF2BPO75031 334 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 LSM8O95777 96 aaKnown RBP12.01□□□□□ -0.49
SLIRP-205ENST00000556310 LMNAP02545 664 aaKnown RBP12.01□□□□□ -0.49
SLIRP-205ENST00000556310 CYBBP04839 570 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 SOX5P35711 763 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 KIR2DL1P43626 348 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-205ENST00000556310 FNTBP49356 437 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 DGKGP49619 791 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 TBX4P57082 545 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 YWHAZP63104 245 aaKnown RBP12.01□□□□□ -0.49
SLIRP-205ENST00000556310 LSM11P83369 360 aaKnown RBP eCLIP12.01□□□□□ -0.49
SLIRP-205ENST00000556310 DMWDQ09019 674 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 DMC1Q14565 340 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 C2orf27AQ580R0 203 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 C10orf76Q5T2E6 689 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 OLFML1Q6UWY5 402 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 TOGARAM2Q6ZUX3 1019 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 FAM183BPQ6ZVS7 135 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 NOP9Q86U38 636 aaKnown RBP12.01□□□□□ -0.49
SLIRP-205ENST00000556310 TAC4Q86UU9 113 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 WDR5BQ86VZ2 330 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 LONP2Q86WA8 852 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 ZNF677Q86XU0 584 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 UNC45BQ8IWX7 931 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 CAMKK1Q8N5S9 505 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 BHMTQ93088 406 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 P2RY11Q96G91 374 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 PCMTD1Q96MG8 357 aaPredicted RBP12.01□□□□□ -0.49
SLIRP-205ENST00000556310 EPC1Q9H2F5 836 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 SYNCQ9H7C4 482 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 NLRC4Q9NPP4 1024 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 RABGEF1Q9UJ41 708 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 NOCTQ9UK39 431 aaKnown RBP12.01□□□□□ -0.49
SLIRP-205ENST00000556310 FBXO10Q9UK96 956 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 NAALADL1Q9UQQ1 740 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 TLR6Q9Y2C9 796 aa12.01□□□□□ -0.49
SLIRP-205ENST00000556310 GFRA2O00451 464 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 TRIM24O15164 1050 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 IRAK2O43187 625 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 GFPT2O94808 682 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 APBB3O95704 486 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 IGLV3-25P01717 112 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 ERBB2P04626 1255 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 CNR2P34972 360 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 STAT1P42224 750 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 SLC11A2P49281 568 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 IQCB1Q15051 598 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 TAF5Q15542 800 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 SKOR2Q2VWA4 1001 aaPredicted RBP12□□□□□ -0.49
SLIRP-205ENST00000556310 MPPE1Q53F39 396 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 EFHC1Q5JVL4 640 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 ADGRF1Q5T601 910 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 TAF3Q5VWG9 929 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 SYPL2Q5VXT5 272 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 HEATR6Q6AI08 1181 aaKnown RBP12□□□□□ -0.49
SLIRP-205ENST00000556310 SLC26A9Q7LBE3 791 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 TRMT11Q7Z4G4 463 aaKnown RBP12□□□□□ -0.49
SLIRP-205ENST00000556310 ZDHHC17Q8IUH5 632 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 ALLCQ8N6M5 410 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 IL17RCQ8NAC3 791 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 SUMF1Q8NBK3 374 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 ZNF397Q8NF99 534 aaPredicted RBP12□□□□□ -0.49
SLIRP-205ENST00000556310 AZIN2Q96A70 460 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 SLC39A13Q96H72 371 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 FCRL2Q96LA5 508 aaPredicted RBP12□□□□□ -0.49
SLIRP-205ENST00000556310 SLC2A13Q96QE2 648 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 HHIPQ96QV1 700 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 IRX2Q9BZI1 471 aaPredicted RBP12□□□□□ -0.49
SLIRP-205ENST00000556310 POLR3BQ9NW08 1133 aaPredicted RBP12□□□□□ -0.49
SLIRP-205ENST00000556310 PLK2Q9NYY3 685 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 SMG5Q9UPR3 1016 aaKnown RBP12□□□□□ -0.49
SLIRP-205ENST00000556310 SLC27A6Q9Y2P4 619 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 STARD13Q9Y3M8 1113 aa12□□□□□ -0.49
SLIRP-205ENST00000556310 PLXND1Q9Y4D7 1925 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 PTPRZ1P23471 2315 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-205ENST00000556310 RCCD1A6NED2 376 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 ANTXRLA6NF34 631 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 ACSL4O60488 711 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 DAB1O75553 588 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 KLF8O95600 359 aaPredicted RBP11.99□□□□□ -0.49
SLIRP-205ENST00000556310 CAVIN2O95810 425 aa11.99□□□□□ -0.49
SLIRP-205ENST00000556310 TRUB2O95900 331 aaKnown RBP11.99□□□□□ -0.49
SLIRP-205ENST00000556310 APOEP02649 317 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms