RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 HMGB4Q8WW32 186 aa12.33□□□□□ -0.44
VRK1-204ENST00000555351 TMA16Q96EY4 203 aaKnown RBP12.33□□□□□ -0.44
VRK1-204ENST00000555351 P2RY11Q96G91 374 aa12.33□□□□□ -0.44
VRK1-204ENST00000555351 NOX5Q96PH1 765 aa12.33□□□□□ -0.44
VRK1-204ENST00000555351 TUBGCP2Q9BSJ2 902 aa12.33□□□□□ -0.44
VRK1-204ENST00000555351 ST7Q9NRC1 585 aa12.33□□□□□ -0.44
VRK1-204ENST00000555351 TMEM51Q9NW97 253 aa12.33□□□□□ -0.44
VRK1-204ENST00000555351 ASNSD1Q9NWL6 643 aa12.33□□□□□ -0.44
VRK1-204ENST00000555351 ELOVL2Q9NXB9 296 aa12.33□□□□□ -0.44
VRK1-204ENST00000555351 PLK2Q9NYY3 685 aa12.33□□□□□ -0.44
VRK1-204ENST00000555351 SFMBT1Q9UHJ3 866 aa12.33□□□□□ -0.44
VRK1-204ENST00000555351 DCHS1Q96JQ0 3298 aa12.33□□□□□ -0.44
VRK1-204ENST00000555351 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.32□□□□□ -0.44
VRK1-204ENST00000555351 AP5Z1O43299 807 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 ACSL4O60488 711 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 CAVIN2O95810 425 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 TBX4P57082 545 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 YWHAZP63104 245 aaKnown RBP12.32□□□□□ -0.44
VRK1-204ENST00000555351 CREB5Q02930 508 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 PDCLQ13371 301 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 STARD3Q14849 445 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 GEN1Q17RS7 908 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 AASDHQ4L235 1098 aaPredicted RBP12.32□□□□□ -0.44
VRK1-204ENST00000555351 MIIPQ5JXC2 388 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 DENND1BQ6P3S1 775 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 CREBRFQ8IUR6 639 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 FAM71AQ8IYT1 594 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 PGBD3Q8N328 593 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 ENOX1Q8TC92 643 aaKnown RBP12.32□□□□□ -0.44
VRK1-204ENST00000555351 DQX1Q8TE96 717 aaKnown RBP12.32□□□□□ -0.44
VRK1-204ENST00000555351 BHMTQ93088 406 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 SLC39A13Q96H72 371 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 ACOX2Q99424 681 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 MIS12Q9H081 205 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 POPDC2Q9HBU9 364 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 SIX2Q9NPC8 291 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 EVLQ9UI08 416 aaPredicted RBP12.32□□□□□ -0.44
VRK1-204ENST00000555351 DAAM1Q9Y4D1 1078 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 STON1Q9Y6Q2 735 aa12.32□□□□□ -0.44
VRK1-204ENST00000555351 E5RJQ4 531 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 GOLGA6L22H0YM25 854 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 CAPN9O14815 690 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 PAPSS1O43252 624 aaPredicted RBP12.31□□□□□ -0.44
VRK1-204ENST00000555351 MAP3K13O43283 966 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 MSI1O43347 362 aaKnown RBP12.31□□□□□ -0.44
VRK1-204ENST00000555351 IGLV3-25P01717 112 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 SLC2A3P11169 496 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 BCKDHBP21953 392 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 SF3A2Q15428 464 aaKnown RBP12.31□□□□□ -0.44
VRK1-204ENST00000555351 ARHGAP44Q17R89 818 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 FAM133BQ5BKY9 247 aaKnown RBP12.31□□□□□ -0.44
VRK1-204ENST00000555351 TCP11X2Q5H9J9 407 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 EFHC1Q5JVL4 640 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 PIK3R6Q5UE93 754 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 PEAR1Q5VY43 1037 aaPredicted RBP12.31□□□□□ -0.44
VRK1-204ENST00000555351 DPY19L2P1Q6NXN4 242 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 GJB7Q6PEY0 223 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 CYP2U1Q7Z449 544 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 RABEPKQ7Z6M1 372 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 AHI1Q8N157 1196 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 HJURPQ8NCD3 748 aaPredicted RBP12.31□□□□□ -0.44
VRK1-204ENST00000555351 CLEC4CQ8WTT0 213 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 FCRL2Q96LA5 508 aaPredicted RBP12.31□□□□□ -0.44
VRK1-204ENST00000555351 MRGPRX1Q96LB2 322 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 FBRSQ9HAH7 460 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 ZDHHC4Q9NPG8 344 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 CACNA2D2Q9NY47 1150 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 CALCOCO1Q9P1Z2 691 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 CYTH4Q9UIA0 394 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 DNAJC12Q9UKB3 198 aa12.31□□□□□ -0.44
VRK1-204ENST00000555351 TNRC6BQ9UPQ9 1833 aaKnown RBP12.31□□□□□ -0.44
VRK1-204ENST00000555351 MYO18AQ92614 2054 aaKnown RBP12.31□□□□□ -0.44
VRK1-204ENST00000555351 TYW5A2RUC4 315 aaKnown RBP12.3□□□□□ -0.44
VRK1-204ENST00000555351 KCNJ18B7U540 433 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 PIK3R2O00459 728 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 TM4SF5O14894 197 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 KHNYNO15037 678 aaKnown RBP12.3□□□□□ -0.44
VRK1-204ENST00000555351 CALCAP01258 141 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 IGLV3-19P01714 112 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 NDUFV2P19404 249 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 HLA-FP30511 346 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 KRT9P35527 623 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 USP8P40818 1118 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 EIF4EBP2Q13542 120 aaPredicted RBP12.3□□□□□ -0.44
VRK1-204ENST00000555351 KCNJ12Q14500 433 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 ZNF234Q14588 700 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 ZDHHC17Q8IUH5 632 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 SYT12Q8IV01 421 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 WDTC1Q8N5D0 677 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 KDM1BQ8NB78 822 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 FIBINQ8TAL6 211 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 FAM149B1Q96BN6 582 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 PPP1R13BQ96KQ4 1090 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 BTN2A3PQ96KV6 586 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 PLCB1Q9NQ66 1216 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.3□□□□□ -0.44
VRK1-204ENST00000555351 MBD1Q9UIS9 605 aaPredicted RBP12.3□□□□□ -0.44
VRK1-204ENST00000555351 NAALADL1Q9UQQ1 740 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 INVSQ9Y283 1065 aa12.3□□□□□ -0.44
VRK1-204ENST00000555351 NFE2L3Q9Y4A8 694 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms