RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ATXN1P54253 815 aaKnown RBP13.17□□□□□ -0.3
SYNE2-219ENST00000555323 AIF1P55008 147 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 MLLT6P55198 1093 aaPredicted RBP13.17□□□□□ -0.3
SYNE2-219ENST00000555323 KIF5AQ12840 1032 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 PDGFRLQ15198 375 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 EML3Q32P44 896 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 RAB6CQ53S08 254 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 ADGRF1Q5T601 910 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 CC2D1AQ6P1N0 951 aaPredicted RBP13.17□□□□□ -0.3
SYNE2-219ENST00000555323 RNF135Q8IUD6 432 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 DENND1CQ8IV53 801 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 BBS7Q8IWZ6 715 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 CPXM2Q8N436 756 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 ATP6V0D2Q8N8Y2 350 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 IRF7Q92985 503 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 NTAN1Q96AB6 310 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 BTN2A3PQ96KV6 586 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 HAPLN3Q96S86 360 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 DESI2Q9BSY9 194 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 RAB6CQ9H0N0 254 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 ANLNQ9NQW6 1124 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 SLC2A4RGQ9NR83 387 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 DUS2Q9NX74 493 aaKnown RBP13.17□□□□□ -0.3
SYNE2-219ENST00000555323 SLC12A6Q9UHW9 1150 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 SALL4Q9UJQ4 1053 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 TFR2Q9UP52 801 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 SORCS3Q9UPU3 1222 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 DUSP10Q9Y6W6 482 aa13.17□□□□□ -0.3
SYNE2-219ENST00000555323 I6L893 689 aaPredicted RBP13.16□□□□□ -0.3
SYNE2-219ENST00000555323 LRCH4O75427 683 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 PROSCO94903 275 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 APOEP02649 317 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 CCDC175P0C221 793 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 IRF1P10914 325 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 SRFP11831 508 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 GDI1P31150 447 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 MAN1A1P33908 653 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 ADRA1BP35368 520 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 SLC11A2P49281 568 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 SCAPQ12770 1279 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 GRM2Q14416 872 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 CDO1Q16878 200 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 KIAA1328Q86T90 577 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 YAF2Q8IY57 180 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 ASIC4Q96FT7 647 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 BTBD6Q96KE9 485 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 ZNF830Q96NB3 372 aaPredicted RBP13.16□□□□□ -0.3
SYNE2-219ENST00000555323 TKTL2Q9H0I9 626 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 HPS4Q9NQG7 708 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 DUSP12Q9UNI6 340 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 WNT6Q9Y6F9 365 aa13.16□□□□□ -0.3
SYNE2-219ENST00000555323 SYNJ2BP-COX16A0A087WUM0 186 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 PAGE1O75459 146 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 MIPP30301 263 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 SLC1A1P43005 524 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 IFNAR2P48551 515 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 RUNX3Q13761 415 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 ARL13BQ3SXY8 428 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 BOLA3Q53S33 107 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 FAM133BQ5BKY9 247 aaKnown RBP13.15□□□□□ -0.3
SYNE2-219ENST00000555323 ARTNQ5T4W7 220 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 NADSYN1Q6IA69 706 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 RHBDF2Q6PJF5 856 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 SLFN11Q7Z7L1 901 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 FAM131BQ86XD5 332 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 PSTKQ8IV42 348 aaKnown RBP13.15□□□□□ -0.3
SYNE2-219ENST00000555323 RNF10Q8N5U6 811 aaKnown RBP13.15□□□□□ -0.3
SYNE2-219ENST00000555323 TPCN2Q8NHX9 752 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 DNASE1L2Q92874 299 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 RNF34Q969K3 372 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 ZFYVE19Q96K21 471 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 PRMT1Q99873 361 aaKnown RBP13.15□□□□□ -0.3
SYNE2-219ENST00000555323 DDX50Q9BQ39 737 aaKnown RBP13.15□□□□□ -0.3
SYNE2-219ENST00000555323 TSGA10Q9BZW7 698 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 OSBPL2Q9H1P3 480 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 BRD9Q9H8M2 597 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 ECT2Q9H8V3 914 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 COX16Q9P0S2 106 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 XPO7Q9UIA9 1087 aaKnown RBP13.15□□□□□ -0.3
SYNE2-219ENST00000555323 MYO10Q9HD67 2058 aa13.15□□□□□ -0.3
SYNE2-219ENST00000555323 TCF20Q9UGU0 1960 aaKnown RBP13.14□□□□□ -0.31
SYNE2-219ENST00000555323 A0A0U1RQJ8 604 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 OTOL1A6NHN0 477 aaPredicted RBP13.14□□□□□ -0.31
SYNE2-219ENST00000555323 KRT86O43790 486 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 NFATC1O95644 943 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 NOP2P46087 812 aaKnown RBP13.14□□□□□ -0.31
SYNE2-219ENST00000555323 PFKPQ01813 784 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 NRG1Q02297 640 aaPredicted RBP13.14□□□□□ -0.31
SYNE2-219ENST00000555323 DHCR24Q15392 516 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 C5orf22Q49AR2 442 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 MS4A13Q5J8X5 152 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 MPP7Q5T2T1 576 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 TRIM68Q6AZZ1 485 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 CYP4V2Q6ZWL3 525 aaPredicted RBP13.14□□□□□ -0.31
SYNE2-219ENST00000555323 UBALD2Q8IYN6 164 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 UBE2Q2Q8WVN8 375 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 ATRIPQ8WXE1 791 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 ATP2A3Q93084 1043 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 EBF3Q9H4W6 596 aa13.14□□□□□ -0.31
SYNE2-219ENST00000555323 SPHK2Q9NRA0 654 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms