RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 C19orf67A6NJJ6 358 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 KLKB1P03952 638 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 IRF1P10914 325 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 SP100P23497 879 aaPredicted RBP17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 NAP1L1P55209 391 aaKnown RBP17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 SCAPQ12770 1279 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 MESDQ14696 234 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 FAM131BQ86XD5 332 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 TRIM44Q96DX7 344 aaPredicted RBP17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 BTBD6Q96KE9 485 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 LRRC3BQ96PB8 259 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 HAPLN3Q96S86 360 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 DDX50Q9BQ39 737 aaKnown RBP17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 KCNK12Q9HB15 430 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 LIMD1Q9UGP4 676 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 CHADO15335 359 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 PRPSAP2O60256 369 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 ACSL4O60488 711 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 BUB1BO60566 1050 aaPredicted RBP17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 MIPP30301 263 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 ADRA1BP35368 520 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 CHKAP35790 457 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 PDGFRLQ15198 375 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 HADHQ16836 314 aaKnown RBP17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 BOLA3Q53S33 107 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 ADGRF1Q5T601 910 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 DENND1CQ8IV53 801 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 FAM217AQ8IXS0 508 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 YAF2Q8IY57 180 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 SYCE1Q8N0S2 351 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 CPXM2Q8N436 756 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 ARFGAP1Q8N6T3 406 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 RIN3Q8TB24 985 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 OSCP1Q8WVF1 389 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 C1orf74Q96LT6 269 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 KXD1Q9BQD3 176 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 TRMT61BQ9BVS5 477 aaKnown RBP17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 TKTL2Q9H0I9 626 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 KCND1Q9NSA2 647 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 TRIM10Q9UDY6 481 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 AGO1Q9UL18 857 aaKnown RBP17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 USP18Q9UMW8 372 aa17.06■□□□□ 0.32
SPTLC2-203ENST00000554901 C5orf42Q9H799 3197 aa17.05■□□□□ 0.32
SPTLC2-203ENST00000554901 MACROD2A1Z1Q3 448 aa17.05■□□□□ 0.32
SPTLC2-203ENST00000554901 BUB1O43683 1085 aa17.05■□□□□ 0.32
SPTLC2-203ENST00000554901 ATXN1P54253 815 aaKnown RBP17.05■□□□□ 0.32
SPTLC2-203ENST00000554901 LRRC38Q5VT99 294 aa17.05■□□□□ 0.32
SPTLC2-203ENST00000554901 SCYL2Q6P3W7 929 aa17.05■□□□□ 0.32
SPTLC2-203ENST00000554901 SLFN11Q7Z7L1 901 aa17.05■□□□□ 0.32
SPTLC2-203ENST00000554901 DAAM2Q86T65 1068 aa17.05■□□□□ 0.32
SPTLC2-203ENST00000554901 TEKT4Q8WW24 435 aa17.05■□□□□ 0.32
SPTLC2-203ENST00000554901 WBP2Q969T9 261 aa17.05■□□□□ 0.32
SPTLC2-203ENST00000554901 LZTFL1Q9NQ48 299 aa17.05■□□□□ 0.32
SPTLC2-203ENST00000554901 PYCARDQ9ULZ3 195 aa17.05■□□□□ 0.32
SPTLC2-203ENST00000554901 GUCA1BQ9UMX6 200 aa17.05■□□□□ 0.32
SPTLC2-203ENST00000554901 A0A0U1RQJ8 604 aa17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 IFNAR2P48551 515 aa17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 NRG1Q02297 640 aaPredicted RBP17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 EFHC2Q5JST6 749 aa17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 POLNQ7Z5Q5 900 aa17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 BBS7Q8IWZ6 715 aa17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 REXO1L1PQ8IX06 675 aa17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 LRRC57Q8N9N7 239 aa17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 KIAA1524Q8TCG1 905 aa17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 ATRIPQ8WXE1 791 aa17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 FAM83CQ9BQN1 747 aa17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 PLA2G2FQ9BZM2 168 aa17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 OSBPL2Q9H1P3 480 aa17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 TRPV5Q9NQA5 729 aa17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 DUS2Q9NX74 493 aaKnown RBP17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 ALG6Q9Y672 507 aa17.04■□□□□ 0.32
SPTLC2-203ENST00000554901 PAGE1O75459 146 aa17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 MOCS2O96007 188 aaPredicted RBP17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 KRT7P08729 469 aa17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 ZNF135P52742 658 aaPredicted RBP17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 MLLT6P55198 1093 aaPredicted RBP17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 SLC25A11Q02978 314 aaKnown RBP17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 RAB6CQ53S08 254 aa17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 TJAP1Q5JTD0 557 aa17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 ERMARDQ5T6L9 678 aa17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 CCAR2Q8N163 923 aaKnown RBP17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 SLC44A3Q8N4M1 653 aa17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 TTC16Q8NEE8 873 aa17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 TRIM58Q8NG06 486 aa17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 IRF7Q92985 503 aa17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 ATP2A3Q93084 1043 aa17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 ALS2CR12Q96Q35 445 aa17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 RAB6CQ9H0N0 254 aa17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 FZD10Q9ULW2 581 aa17.03■□□□□ 0.32
SPTLC2-203ENST00000554901 GRID2IPA4D2P6 1211 aa17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 TMEM110-MUSTN1A8MSY1 372 aa17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 SPOPO43791 374 aa17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 MOCS3O95396 460 aa17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 NFATC1O95644 943 aa17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 COMTP21964 271 aa17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 HTR7P34969 479 aa17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 TDGQ13569 410 aa17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 EML3Q32P44 896 aa17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 FAM133BQ5BKY9 247 aaKnown RBP17.02■□□□□ 0.32
SPTLC2-203ENST00000554901 MS4A13Q5J8X5 152 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms