RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 CLSTN1O94985 981 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 CCDC130P13994 396 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 ATP5C1P36542 298 aaKnown RBP12.41□□□□□ -0.42
SRP54-203ENST00000553544 PPP1R2P41236 205 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 MXI1P50539 228 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 E2F5Q15329 346 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 CBWD6Q4V339 395 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 CBWD3Q5JTY5 395 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 CBWD5Q5RIA9 395 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 DCAF12L1Q5VU92 463 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 ISM2Q6H9L7 571 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 FOXR2Q6PJQ5 311 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 FBXL13Q8NEE6 735 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 SLC2A14Q8TDB8 520 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 HNRNPABQ99729 332 aaKnown RBP12.41□□□□□ -0.42
SRP54-203ENST00000553544 NT5C1AQ9BXI3 368 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 KLF16Q9BXK1 252 aaPredicted RBP12.41□□□□□ -0.42
SRP54-203ENST00000553544 FBXO44Q9H4M3 255 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 MMRN2Q9H8L6 949 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 RAB20Q9NX57 234 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 TOR4AQ9NXH8 423 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 MARK1Q9P0L2 795 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 GMIPQ9P107 970 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 LSM7Q9UK45 103 aaKnown RBP12.41□□□□□ -0.42
SRP54-203ENST00000553544 KNTC1P50748 2209 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 PLXNB3Q9ULL4 1909 aa12.41□□□□□ -0.42
SRP54-203ENST00000553544 KNL1Q8NG31 2342 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 TK2O00142 265 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 PSMA7O14818 248 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 SYNCRIPO60506 623 aaKnown RBP12.4□□□□□ -0.42
SRP54-203ENST00000553544 GREM1O60565 184 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 TLR5O60602 858 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 TBX18O95935 607 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 TPMTP51580 245 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 SLC5A3P53794 718 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 MORC3Q14149 939 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 FUT11Q495W5 492 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 TTI2Q6NXR4 508 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 TMPRSS6Q8IU80 811 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 CCDC150Q8NCX0 1101 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 BAHD1Q8TBE0 780 aaPredicted RBP12.4□□□□□ -0.42
SRP54-203ENST00000553544 ADAM32Q8TC27 787 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 TATDN2Q93075 761 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 SLC35C1Q96A29 364 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 CYFIP2Q96F07 1278 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 SIPA1Q96FS4 1042 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 UBL7Q96S82 380 aaPredicted RBP12.4□□□□□ -0.42
SRP54-203ENST00000553544 TLR8Q9NR97 1041 aaKnown RBP12.4□□□□□ -0.42
SRP54-203ENST00000553544 KRT82Q9NSB4 513 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 FAM49BQ9NUQ9 324 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 USP36Q9P275 1121 aaKnown RBP12.4□□□□□ -0.42
SRP54-203ENST00000553544 EIF2B4Q9UI10 523 aaKnown RBP12.4□□□□□ -0.42
SRP54-203ENST00000553544 FBXO10Q9UK96 956 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 FNDC3AQ9Y2H6 1198 aaKnown RBP12.4□□□□□ -0.42
SRP54-203ENST00000553544 KALRNO60229 2985 aa12.4□□□□□ -0.42
SRP54-203ENST00000553544 HHLA1C9JL84 531 aa12.39□□□□□ -0.43
SRP54-203ENST00000553544 E9PAM4 449 aa12.39□□□□□ -0.43
SRP54-203ENST00000553544 PMM2O15305 246 aa12.39□□□□□ -0.43
SRP54-203ENST00000553544 TNFSF14O43557 240 aa12.39□□□□□ -0.43
SRP54-203ENST00000553544 ACADMP11310 421 aa12.39□□□□□ -0.43
SRP54-203ENST00000553544 CD58P19256 250 aa12.39□□□□□ -0.43
SRP54-203ENST00000553544 PLA2G4AP47712 749 aa12.39□□□□□ -0.43
SRP54-203ENST00000553544 CSNK1EP49674 416 aaKnown RBP12.39□□□□□ -0.43
SRP54-203ENST00000553544 AFF3P51826 1226 aaKnown RBP12.39□□□□□ -0.43
SRP54-203ENST00000553544 BNC1Q01954 994 aa12.39□□□□□ -0.43
SRP54-203ENST00000553544 CAMK2BQ13554 666 aa12.39□□□□□ -0.43
SRP54-203ENST00000553544 STIM1Q13586 685 aa12.39□□□□□ -0.43
SRP54-203ENST00000553544 CLEC20AQ6ZU45 233 aa12.39□□□□□ -0.43
SRP54-203ENST00000553544 MARCH9Q86YJ5 346 aa12.39□□□□□ -0.43
SRP54-203ENST00000553544 TTC39CQ8N584 583 aa12.39□□□□□ -0.43
SRP54-203ENST00000553544 UCMAQ8WVF2 138 aa12.39□□□□□ -0.43
SRP54-203ENST00000553544 PRCCQ92733 491 aaPredicted RBP12.39□□□□□ -0.43
SRP54-203ENST00000553544 CEP63Q96MT8 703 aa12.39□□□□□ -0.43
SRP54-203ENST00000553544 MKRN2Q9H000 416 aaKnown RBP12.39□□□□□ -0.43
SRP54-203ENST00000553544 METTL14Q9HCE5 456 aaKnown RBP12.39□□□□□ -0.43
SRP54-203ENST00000553544 THAP10Q9P2Z0 257 aaPredicted RBP12.39□□□□□ -0.43
SRP54-203ENST00000553544 ARMCX3Q9UH62 379 aaPredicted RBP12.39□□□□□ -0.43
SRP54-203ENST00000553544 CABIN1Q9Y6J0 2220 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 A0A1B0GVT2 93 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 KCNJ18B7U540 433 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 FAM200BP0CF97 657 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 TRIM21P19474 475 aaKnown RBP12.38□□□□□ -0.43
SRP54-203ENST00000553544 ACO1P21399 889 aaKnown RBP12.38□□□□□ -0.43
SRP54-203ENST00000553544 ADORA2BP29275 332 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 PGFP49763 221 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 MAP3K7CLP57077 242 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 UBE2HP62256 183 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 TEAD4Q15561 434 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 SMAD1Q15797 465 aaKnown RBP12.38□□□□□ -0.43
SRP54-203ENST00000553544 DCAF17Q5H9S7 520 aaPredicted RBP12.38□□□□□ -0.43
SRP54-203ENST00000553544 PPP1R26Q5T8A7 1209 aaPredicted RBP12.38□□□□□ -0.43
SRP54-203ENST00000553544 TCERG1LQ5VWI1 586 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 SLC4A11Q8NBS3 891 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 C1orf216Q8TAB5 229 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 SLC39A7Q92504 469 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 BHMTQ93088 406 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 ARID3AQ99856 593 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 PCED1AQ9H1Q7 454 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 PNPLA8Q9NP80 782 aa12.38□□□□□ -0.43
SRP54-203ENST00000553544 CISHQ9NSE2 258 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms