RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 MAPK6Q16659 721 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.99□□□□□ -1.29
UBE2N-204ENST00000549833 HAUS6Q7Z4H7 955 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 FRMD5Q7Z6J6 570 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 TMCO2Q7Z6W1 182 aaPredicted RBP6.99□□□□□ -1.29
UBE2N-204ENST00000549833 SPATS2Q86XZ4 545 aaKnown RBP6.99□□□□□ -1.29
UBE2N-204ENST00000549833 ZDHHC14Q8IZN3 488 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 KLHL36Q8N4N3 616 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 OR2W6PQ8NHA6 318 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 HERVK_113Q902F9 699 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 APBB2Q92870 758 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 USP7Q93009 1102 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 TIGD1Q96MW7 591 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 TTC1Q99614 292 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 ADAM2Q99965 735 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 NTPCRQ9BSD7 190 aaKnown RBP6.99□□□□□ -1.29
UBE2N-204ENST00000549833 BTBD2Q9BX70 525 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 NFKBIZQ9BYH8 718 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 IKZF4Q9H2S9 585 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 FZD8Q9H461 694 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 MRPL44Q9H9J2 332 aaKnown RBP6.99□□□□□ -1.29
UBE2N-204ENST00000549833 C17orf75Q9HAS0 396 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 AGPAT5Q9NUQ2 364 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 LARSQ9P2J5 1176 aaKnown RBP6.99□□□□□ -1.29
UBE2N-204ENST00000549833 FBXO10Q9UK96 956 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 PIN4Q9Y237 131 aaKnown RBP6.99□□□□□ -1.29
UBE2N-204ENST00000549833 COL4A4P53420 1690 aaPredicted RBP6.99□□□□□ -1.29
UBE2N-204ENST00000549833 PHLPP2Q6ZVD8 1323 aa6.99□□□□□ -1.29
UBE2N-204ENST00000549833 ABHD14A-ACY1A0A1B0GW23 586 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 PVALEFA0A1B0GWK0 134 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 KLHL18O94889 574 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 PRPF6O94906 941 aaKnown RBP6.98□□□□□ -1.29
UBE2N-204ENST00000549833 GCNT3O95395 438 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 MYL1P05976 194 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 ACTN1P12814 892 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 ATP2A2P16615 1042 aaKnown RBP6.98□□□□□ -1.29
UBE2N-204ENST00000549833 ARF4P18085 180 aaPredicted RBP6.98□□□□□ -1.29
UBE2N-204ENST00000549833 HOXA5P20719 270 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 HOXA11P31270 313 aaPredicted RBP6.98□□□□□ -1.29
UBE2N-204ENST00000549833 SCNN1BP51168 640 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 EFNA5P52803 228 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 EPHB1P54762 984 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 IL13RA1P78552 427 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 GTF2BQ00403 316 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 OCRLQ01968 901 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 PRPF4BQ13523 1007 aaKnown RBP6.98□□□□□ -1.29
UBE2N-204ENST00000549833 FAM187BQ17R55 369 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 SKOR2Q2VWA4 1001 aaPredicted RBP6.98□□□□□ -1.29
UBE2N-204ENST00000549833 WDR72Q3MJ13 1102 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 UBXN11Q5T124 520 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 TWF2Q6IBS0 349 aaKnown RBP6.98□□□□□ -1.29
UBE2N-204ENST00000549833 CXXC5Q7LFL8 322 aaKnown RBP6.98□□□□□ -1.29
UBE2N-204ENST00000549833 ZNF720Q7Z2F6 126 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 PASD1Q8IV76 773 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 REXO1L1PQ8IX06 675 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 MYOCDQ8IZQ8 938 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 LGI4Q8N135 537 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 NXPE1Q8N323 547 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 EFHBQ8N7U6 833 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 ZBTB45Q96K62 511 aaPredicted RBP6.98□□□□□ -1.29
UBE2N-204ENST00000549833 FOXB1Q99853 325 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 STRA6Q9BX79 667 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 FTHL17Q9BXU8 183 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 EIF2AQ9BY44 585 aaKnown RBP6.98□□□□□ -1.29
UBE2N-204ENST00000549833 OR10A5Q9H207 317 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 PRO3102Q9H379 93 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 CLSTN2Q9H4D0 955 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 PDZD7Q9H5P4 517 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 IFT22Q9H7X7 185 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 OLFML3Q9NRN5 406 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 EXOC1Q9NV70 894 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 PRMT7Q9NVM4 692 aaPredicted RBP6.98□□□□□ -1.29
UBE2N-204ENST00000549833 SEL1LQ9UBV2 794 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 TBX20Q9UMR3 447 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 SPO11Q9Y5K1 396 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 LAMA3Q16787 3333 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 CNTNAP2Q9UHC6 1331 aa6.98□□□□□ -1.29
UBE2N-204ENST00000549833 TRANK1O15050 2925 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 CHD9Q3L8U1 2897 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 UBA6A0AVT1 1052 aaPredicted RBP6.97□□□□□ -1.29
UBE2N-204ENST00000549833 GRXCR1A8MXD5 290 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 TISP43B9A030 160 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 ANKRD63C9JTQ0 380 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 H0YCG3 227 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 ACKR2O00590 384 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 NEMP1O14524 444 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 DVL2O14641 736 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 BAIAP3O94812 1187 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 HARSP12081 509 aaKnown RBP6.97□□□□□ -1.29
UBE2N-204ENST00000549833 ZSCAN20P17040 1043 aaPredicted RBP6.97□□□□□ -1.29
UBE2N-204ENST00000549833 BPIP17213 487 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 ATF7P17544 494 aaPredicted RBP6.97□□□□□ -1.29
UBE2N-204ENST00000549833 AXLP30530 894 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 HOXD13P35453 343 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 GATMP50440 423 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 KPNA1P52294 538 aaPredicted RBP6.97□□□□□ -1.29
UBE2N-204ENST00000549833 TMPRSS15P98073 1019 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 ALDH6A1Q02252 535 aaKnown RBP6.97□□□□□ -1.29
UBE2N-204ENST00000549833 STK4Q13043 487 aa6.97□□□□□ -1.29
UBE2N-204ENST00000549833 STILQ15468 1287 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms