RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 ADAM23O75077 832 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 TRUB2O95900 331 aaKnown RBP16.41■□□□□ 0.22
DDX54-205ENST00000548786 SLC6A4P31645 630 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 SOX5P35711 763 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 SLC11A2P49281 568 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 DGKEP52429 567 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 JAM2P57087 298 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 GEN1Q17RS7 908 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 ZC3H12AQ5D1E8 599 aaKnown RBP16.41■□□□□ 0.22
DDX54-205ENST00000548786 ADGRF1Q5T601 910 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 NUGGCQ68CJ6 796 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 NADSYN1Q6IA69 706 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 OLFML1Q6UWY5 402 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 NUDT18Q6ZVK8 323 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 UNC45BQ8IWX7 931 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 FAM217AQ8IXS0 508 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 TRIM62Q9BVG3 475 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 STIM2Q9P246 746 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 XPO7Q9UIA9 1087 aaKnown RBP16.41■□□□□ 0.22
DDX54-205ENST00000548786 NOCTQ9UK39 431 aaKnown RBP16.41■□□□□ 0.22
DDX54-205ENST00000548786 RAB23Q9ULC3 237 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 TLR6Q9Y2C9 796 aa16.41■□□□□ 0.22
DDX54-205ENST00000548786 FAM186AA6NE01 2351 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 A0A0A0MRY4 1105 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 GOLGA8SH3BPF8 625 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 DCLK1O15075 740 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 AXIN1O15169 862 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 ACSL4O60488 711 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 TBL1XO60907 577 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 HSF2BPO75031 334 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 HOXD9P28356 352 aaPredicted RBP16.4■□□□□ 0.22
DDX54-205ENST00000548786 STAT1P42224 750 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 SLC6A3Q01959 620 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 NME3Q13232 169 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 CRY1Q16526 586 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 MPPE1Q53F39 396 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 FAM133BQ5BKY9 247 aaKnown RBP16.4■□□□□ 0.22
DDX54-205ENST00000548786 EFHC1Q5JVL4 640 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 PHLDB2Q86SQ0 1253 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 LUZP1Q86V48 1076 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 ERICH1Q86X53 443 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 CHPFQ8IZ52 775 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 CAMKK1Q8N5S9 505 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 HMGB4Q8WW32 186 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 RNF34Q969K3 372 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 TMA16Q96EY4 203 aaKnown RBP16.4■□□□□ 0.22
DDX54-205ENST00000548786 MYEOVQ96EZ4 313 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 ERGIC2Q96RQ1 377 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 NUCKS1Q9H1E3 243 aaKnown RBP16.4■□□□□ 0.22
DDX54-205ENST00000548786 CBX8Q9HC52 389 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 DDIT4Q9NX09 232 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 CACNA2D2Q9NY47 1150 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 BCCIPQ9P287 314 aaKnown RBP eCLIP16.4■□□□□ 0.22
DDX54-205ENST00000548786 GVINP1Q7Z2Y8 2422 aa16.4■□□□□ 0.22
DDX54-205ENST00000548786 PTPRZ1P23471 2315 aaPredicted RBP16.39■□□□□ 0.21
DDX54-205ENST00000548786 TCRBV21S2A2A0A5A6 115 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 LRRC10BA6NIK2 292 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 IRAK2O43187 625 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 RPP40O75818 363 aaKnown RBP16.39■□□□□ 0.21
DDX54-205ENST00000548786 APOEP02649 317 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 HOXB2P14652 356 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 CHRNB2P17787 502 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 HOXA6P31267 233 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 SNX16P57768 344 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 CDK17Q00537 523 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 RING1Q06587 406 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 IQCB1Q15051 598 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 ZSCAN23Q3MJ62 389 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 EOGTQ5NDL2 527 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 FAM102AQ5T9C2 384 aaPredicted RBP16.39■□□□□ 0.21
DDX54-205ENST00000548786 RAP1GAP2Q684P5 730 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 CACNA2D4Q7Z3S7 1137 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 ANKS1BQ7Z6G8 1248 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.39■□□□□ 0.21
DDX54-205ENST00000548786 PGBD3Q8N328 593 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 MDGA1Q8NFP4 955 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 SORCS1Q8WY21 1168 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 SLC39A13Q96H72 371 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 PRICKLE1Q96MT3 831 aaPredicted RBP16.39■□□□□ 0.21
DDX54-205ENST00000548786 SLC2A13Q96QE2 648 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 CIPCQ9C0C6 399 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 SEPT11Q9NVA2 429 aaKnown RBP16.39■□□□□ 0.21
DDX54-205ENST00000548786 RAD54BQ9Y620 910 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 OTOGLQ3ZCN5 2332 aa16.39■□□□□ 0.21
DDX54-205ENST00000548786 EML5Q05BV3 1969 aa16.38■□□□□ 0.21
DDX54-205ENST00000548786 WASH3PC4AMC7 463 aa16.38■□□□□ 0.21
DDX54-205ENST00000548786 DAB1O75553 588 aa16.38■□□□□ 0.21
DDX54-205ENST00000548786 LATS1O95835 1130 aa16.38■□□□□ 0.21
DDX54-205ENST00000548786 TFE3P19532 575 aaPredicted RBP16.38■□□□□ 0.21
DDX54-205ENST00000548786 PTMSP20962 102 aa16.38■□□□□ 0.21
DDX54-205ENST00000548786 CDH5P33151 784 aaPredicted RBP16.38■□□□□ 0.21
DDX54-205ENST00000548786 NUMBP49757 651 aa16.38■□□□□ 0.21
DDX54-205ENST00000548786 RPS24P62847 133 aaKnown RBP16.38■□□□□ 0.21
DDX54-205ENST00000548786 NOMO3P69849 1222 aa16.38■□□□□ 0.21
DDX54-205ENST00000548786 FMO1Q01740 532 aa16.38■□□□□ 0.21
DDX54-205ENST00000548786 CDR2Q01850 454 aa16.38■□□□□ 0.21
DDX54-205ENST00000548786 PIK3R6Q5UE93 754 aa16.38■□□□□ 0.21
DDX54-205ENST00000548786 MMS22LQ6ZRQ5 1243 aa16.38■□□□□ 0.21
DDX54-205ENST00000548786 BEND5Q7L4P6 421 aa16.38■□□□□ 0.21
DDX54-205ENST00000548786 SLC26A9Q7LBE3 791 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms