RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 CALR3Q96L12 384 aaKnown RBP17.79■□□□□ 0.44
LIG1-204ENST00000542460 KCNU1A8MYU2 1149 aa17.78■□□□□ 0.44
LIG1-204ENST00000542460 CHADO15335 359 aa17.78■□□□□ 0.44
LIG1-204ENST00000542460 LATS1O95835 1130 aa17.78■□□□□ 0.44
LIG1-204ENST00000542460 ASGR2P07307 311 aa17.78■□□□□ 0.44
LIG1-204ENST00000542460 SLC11A2P49281 568 aa17.78■□□□□ 0.44
LIG1-204ENST00000542460 ATXN1P54253 815 aaKnown RBP17.78■□□□□ 0.44
LIG1-204ENST00000542460 GRM2Q14416 872 aa17.78■□□□□ 0.44
LIG1-204ENST00000542460 ATP6V0D2Q8N8Y2 350 aa17.78■□□□□ 0.44
LIG1-204ENST00000542460 OSCP1Q8WVF1 389 aa17.78■□□□□ 0.44
LIG1-204ENST00000542460 OTUB2Q96DC9 234 aa17.78■□□□□ 0.44
LIG1-204ENST00000542460 BTN2A3PQ96KV6 586 aa17.78■□□□□ 0.44
LIG1-204ENST00000542460 DUS2Q9NX74 493 aaKnown RBP17.78■□□□□ 0.44
LIG1-204ENST00000542460 AGO1Q9UL18 857 aaKnown RBP17.78■□□□□ 0.44
LIG1-204ENST00000542460 DUSP10Q9Y6W6 482 aa17.78■□□□□ 0.44
LIG1-204ENST00000542460 NUP210Q8TEM1 1887 aaPredicted RBP17.78■□□□□ 0.44
LIG1-204ENST00000542460 PROSCO94903 275 aa17.77■□□□□ 0.44
LIG1-204ENST00000542460 PDGFRLQ15198 375 aa17.77■□□□□ 0.44
LIG1-204ENST00000542460 ARL13BQ3SXY8 428 aa17.77■□□□□ 0.44
LIG1-204ENST00000542460 RAB6CQ53S08 254 aa17.77■□□□□ 0.44
LIG1-204ENST00000542460 SCYL2Q6P3W7 929 aa17.77■□□□□ 0.44
LIG1-204ENST00000542460 FAM131BQ86XD5 332 aa17.77■□□□□ 0.44
LIG1-204ENST00000542460 BBS7Q8IWZ6 715 aa17.77■□□□□ 0.44
LIG1-204ENST00000542460 FAM83CQ9BQN1 747 aa17.77■□□□□ 0.44
LIG1-204ENST00000542460 TSGA10Q9BZW7 698 aa17.77■□□□□ 0.44
LIG1-204ENST00000542460 TKTL2Q9H0I9 626 aa17.77■□□□□ 0.44
LIG1-204ENST00000542460 RAB6CQ9H0N0 254 aa17.77■□□□□ 0.44
LIG1-204ENST00000542460 LINC00597Q9H2U6 94 aa17.77■□□□□ 0.44
LIG1-204ENST00000542460 ARHGEF38Q9NXL2 777 aa17.77■□□□□ 0.44
LIG1-204ENST00000542460 STOML2Q9UJZ1 356 aa17.77■□□□□ 0.44
LIG1-204ENST00000542460 PPP2R2CQ9Y2T4 447 aa17.77■□□□□ 0.44
LIG1-204ENST00000542460 SCAMP3O14828 347 aaKnown RBP17.77■□□□□ 0.43
LIG1-204ENST00000542460 KRT86O43790 486 aa17.77■□□□□ 0.43
LIG1-204ENST00000542460 ACSL4O60488 711 aa17.77■□□□□ 0.43
LIG1-204ENST00000542460 MOCS2O96007 188 aaPredicted RBP17.77■□□□□ 0.43
LIG1-204ENST00000542460 GDI1P31150 447 aa17.77■□□□□ 0.43
LIG1-204ENST00000542460 PCK1P35558 622 aa17.77■□□□□ 0.43
LIG1-204ENST00000542460 CHKAP35790 457 aa17.77■□□□□ 0.43
LIG1-204ENST00000542460 IFNAR2P48551 515 aa17.77■□□□□ 0.43
LIG1-204ENST00000542460 NAP1L1P55209 391 aaKnown RBP17.77■□□□□ 0.43
LIG1-204ENST00000542460 TDGQ13569 410 aa17.77■□□□□ 0.43
LIG1-204ENST00000542460 MESDQ14696 234 aa17.77■□□□□ 0.43
LIG1-204ENST00000542460 ZNF662Q6ZS27 426 aa17.77■□□□□ 0.43
LIG1-204ENST00000542460 GJD3Q8N144 294 aa17.77■□□□□ 0.43
LIG1-204ENST00000542460 ARFGAP1Q8N6T3 406 aa17.77■□□□□ 0.43
LIG1-204ENST00000542460 SALL4Q9UJQ4 1053 aa17.77■□□□□ 0.43
LIG1-204ENST00000542460 WNT6Q9Y6F9 365 aa17.77■□□□□ 0.43
LIG1-204ENST00000542460 NCOR1O75376 2440 aa17.76■□□□□ 0.43
LIG1-204ENST00000542460 BDP1A6H8Y1 2624 aa17.76■□□□□ 0.43
LIG1-204ENST00000542460 A0A0U1RQJ8 604 aa17.76■□□□□ 0.43
LIG1-204ENST00000542460 LRCH4O75427 683 aa17.76■□□□□ 0.43
LIG1-204ENST00000542460 MAN1A1P33908 653 aa17.76■□□□□ 0.43
LIG1-204ENST00000542460 ADRA1BP35368 520 aa17.76■□□□□ 0.43
LIG1-204ENST00000542460 AIF1P55008 147 aa17.76■□□□□ 0.43
LIG1-204ENST00000542460 IFI16Q16666 785 aaKnown RBP17.76■□□□□ 0.43
LIG1-204ENST00000542460 ADGRF1Q5T601 910 aa17.76■□□□□ 0.43
LIG1-204ENST00000542460 ACBD5Q5T8D3 534 aaPredicted RBP17.76■□□□□ 0.43
LIG1-204ENST00000542460 ADGRG2Q8IZP9 1017 aa17.76■□□□□ 0.43
LIG1-204ENST00000542460 ATRIPQ8WXE1 791 aa17.76■□□□□ 0.43
LIG1-204ENST00000542460 IRF7Q92985 503 aa17.76■□□□□ 0.43
LIG1-204ENST00000542460 NTAN1Q96AB6 310 aa17.76■□□□□ 0.43
LIG1-204ENST00000542460 ZFYVE19Q96K21 471 aa17.76■□□□□ 0.43
LIG1-204ENST00000542460 DDX50Q9BQ39 737 aaKnown RBP17.76■□□□□ 0.43
LIG1-204ENST00000542460 BRD9Q9H8M2 597 aa17.76■□□□□ 0.43
LIG1-204ENST00000542460 BUB1O43683 1085 aa17.75■□□□□ 0.43
LIG1-204ENST00000542460 PRPSAP2O60256 369 aa17.75■□□□□ 0.43
LIG1-204ENST00000542460 PAGE1O75459 146 aa17.75■□□□□ 0.43
LIG1-204ENST00000542460 MIPP30301 263 aa17.75■□□□□ 0.43
LIG1-204ENST00000542460 EML3Q32P44 896 aa17.75■□□□□ 0.43
LIG1-204ENST00000542460 RNF135Q8IUD6 432 aa17.75■□□□□ 0.43
LIG1-204ENST00000542460 FAM217AQ8IXS0 508 aa17.75■□□□□ 0.43
LIG1-204ENST00000542460 RNF10Q8N5U6 811 aaKnown RBP17.75■□□□□ 0.43
LIG1-204ENST00000542460 TPCN2Q8NHX9 752 aa17.75■□□□□ 0.43
LIG1-204ENST00000542460 ATP2A3Q93084 1043 aa17.75■□□□□ 0.43
LIG1-204ENST00000542460 ASIC4Q96FT7 647 aa17.75■□□□□ 0.43
LIG1-204ENST00000542460 HAPLN3Q96S86 360 aa17.75■□□□□ 0.43
LIG1-204ENST00000542460 USP18Q9UMW8 372 aa17.75■□□□□ 0.43
LIG1-204ENST00000542460 SORCS3Q9UPU3 1222 aa17.75■□□□□ 0.43
LIG1-204ENST00000542460 MACROD2A1Z1Q3 448 aa17.74■□□□□ 0.43
LIG1-204ENST00000542460 TMEM110-MUSTN1A8MSY1 372 aa17.74■□□□□ 0.43
LIG1-204ENST00000542460 ZSCAN12O43309 604 aa17.74■□□□□ 0.43
LIG1-204ENST00000542460 BUB1BO60566 1050 aaPredicted RBP17.74■□□□□ 0.43
LIG1-204ENST00000542460 NFATC1O95644 943 aa17.74■□□□□ 0.43
LIG1-204ENST00000542460 SLC1A1P43005 524 aa17.74■□□□□ 0.43
LIG1-204ENST00000542460 TRIM68Q6AZZ1 485 aa17.74■□□□□ 0.43
LIG1-204ENST00000542460 SLFN11Q7Z7L1 901 aa17.74■□□□□ 0.43
LIG1-204ENST00000542460 CPXM2Q8N436 756 aa17.74■□□□□ 0.43
LIG1-204ENST00000542460 CCDC185Q8N715 623 aa17.74■□□□□ 0.43
LIG1-204ENST00000542460 C1orf74Q96LT6 269 aa17.74■□□□□ 0.43
LIG1-204ENST00000542460 EBF3Q9H4W6 596 aa17.74■□□□□ 0.43
LIG1-204ENST00000542460 TRPV5Q9NQA5 729 aa17.74■□□□□ 0.43
LIG1-204ENST00000542460 ANLNQ9NQW6 1124 aa17.74■□□□□ 0.43
LIG1-204ENST00000542460 TRIM10Q9UDY6 481 aa17.74■□□□□ 0.43
LIG1-204ENST00000542460 PCSK1NQ9UHG2 260 aa17.74■□□□□ 0.43
LIG1-204ENST00000542460 XPO7Q9UIA9 1087 aaKnown RBP17.74■□□□□ 0.43
LIG1-204ENST00000542460 HELZP42694 1942 aaKnown RBP17.74■□□□□ 0.43
LIG1-204ENST00000542460 I6L893 689 aaPredicted RBP17.73■□□□□ 0.43
LIG1-204ENST00000542460 ARNTLO00327 626 aa17.73■□□□□ 0.43
LIG1-204ENST00000542460 SRFP11831 508 aa17.73■□□□□ 0.43
LIG1-204ENST00000542460 SSR1P43307 286 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms