RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 HSF2BPO75031 334 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 PAPSS2O95340 614 aaPredicted RBP10.12□□□□□ -0.79
YBX3-212ENST00000542002 GJB6O95452 261 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 CAVIN2O95810 425 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 MMP8P22894 467 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 HOXD9P28356 352 aaPredicted RBP10.12□□□□□ -0.79
YBX3-212ENST00000542002 TIE1P35590 1138 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 FNTBP49356 437 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 CCR3P51677 355 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 UBASH3AP57075 661 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 SRSF5Q13243 272 aaKnown RBP10.12□□□□□ -0.79
YBX3-212ENST00000542002 GEN1Q17RS7 908 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 CLEC16AQ2KHT3 1053 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 FBXO43Q4G163 708 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 FILIP1LQ4L180 1135 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 ARTNQ5T4W7 220 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 PIK3R6Q5UE93 754 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 TMEM215Q68D42 235 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 LRSAM1Q6UWE0 723 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 TMEM92Q6UXU6 159 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 MMS22LQ6ZRQ5 1243 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 SLC26A9Q7LBE3 791 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 ASCL5Q7RTU5 278 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 CACNA2D4Q7Z3S7 1137 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 ALYREFQ86V81 257 aaKnown RBP10.12□□□□□ -0.79
YBX3-212ENST00000542002 DNAAF5Q86Y56 855 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 ALLCQ8N6M5 410 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 IL17RCQ8NAC3 791 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 ZNF397Q8NF99 534 aaPredicted RBP10.12□□□□□ -0.79
YBX3-212ENST00000542002 NT5C3BQ969T7 300 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 AZIN2Q96A70 460 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 TMA16Q96EY4 203 aaKnown RBP10.12□□□□□ -0.79
YBX3-212ENST00000542002 LMLNQ96KR4 655 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 NOX5Q96PH1 765 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 ACOX2Q99424 681 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 AGPAT1Q99943 283 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 IER2Q9BTL4 223 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 IRF2BPLQ9H1B7 796 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 NUCKS1Q9H1E3 243 aaKnown RBP10.12□□□□□ -0.79
YBX3-212ENST00000542002 SYNCQ9H7C4 482 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 ZSCAN32Q9NX65 697 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 TAS2R14Q9NYV8 317 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 IFNKQ9P0W0 207 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 CACNA1IQ9P0X4 2223 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 MYO16Q9Y6X6 1858 aa10.12□□□□□ -0.79
YBX3-212ENST00000542002 SYNJ2BP-COX16A0A087WUM0 186 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.11□□□□□ -0.79
YBX3-212ENST00000542002 WASH3PC4AMC7 463 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 GOLGA8SH3BPF8 625 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 SGK1O00141 431 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 LILRB5O75023 590 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 APODP05090 189 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 NOS2P35228 1153 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 FLT3P36888 993 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 MATKP42679 507 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 DGKGP49619 791 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 ATXN1P54253 815 aaKnown RBP10.11□□□□□ -0.79
YBX3-212ENST00000542002 CDK17Q00537 523 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 NNTQ13423 1086 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 DMC1Q14565 340 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 C10orf76Q5T2E6 689 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 EGFLAMQ63HQ2 1017 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 NUGGCQ68CJ6 796 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 RNF43Q68DV7 783 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 HEATR6Q6AI08 1181 aaKnown RBP10.11□□□□□ -0.79
YBX3-212ENST00000542002 GRAMD4Q6IC98 578 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 SYT13Q7L8C5 426 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 ZNF571Q7Z3V5 609 aaPredicted RBP10.11□□□□□ -0.79
YBX3-212ENST00000542002 BNIPLQ7Z465 357 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 ZDHHC17Q8IUH5 632 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 UNC45BQ8IWX7 931 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 CFAP52Q8N1V2 620 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 EMC1Q8N766 993 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 TERB1Q8NA31 727 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 TXNDC5Q8NBS9 432 aaKnown RBP10.11□□□□□ -0.79
YBX3-212ENST00000542002 RNF214Q8ND24 703 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 WFDC5Q8TCV5 224 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 DDI1Q8WTU0 396 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 PRICKLE1Q96MT3 831 aaPredicted RBP10.11□□□□□ -0.79
YBX3-212ENST00000542002 SERPINB11Q96P15 392 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 XPO6Q96QU8 1125 aaKnown RBP10.11□□□□□ -0.79
YBX3-212ENST00000542002 HHIPQ96QV1 700 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 NPY6RQ99463 290 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 PRMT1Q99873 361 aaKnown RBP10.11□□□□□ -0.79
YBX3-212ENST00000542002 TSPY26PQ9H489 355 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 TMPRSS4Q9NRS4 437 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 PIGVQ9NUD9 493 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 DDIT4Q9NX09 232 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 AIPL1Q9NZN9 384 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 COX16Q9P0S2 106 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 STARD13Q9Y3M8 1113 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 CEP83Q9Y592 693 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 MYOFQ9NZM1 2061 aa10.11□□□□□ -0.79
YBX3-212ENST00000542002 TCRBV5S1A1TA0A578 114 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 GOLGA6L19H0YKK7 550 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 M0QYT0 321 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 AP5Z1O43299 807 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 ATG13O75143 517 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 DAB1O75553 588 aa10.1□□□□□ -0.79
YBX3-212ENST00000542002 KLF8O95600 359 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms