RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 NUDT18Q6ZVK8 323 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 LUZP1Q86V48 1076 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 CAMKK1Q8N5S9 505 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 NAT16Q8N8M0 369 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 MSANTD4Q8NCY6 345 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 ATRIPQ8WXE1 791 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 C18orf8Q96DM3 657 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 SLC2A11Q9BYW1 496 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 EPC1Q9H2F5 836 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 PDCL3Q9H2J4 239 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 SYNCQ9H7C4 482 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 MMP17Q9ULZ9 603 aa13.64□□□□□ -0.23
LTBR-208ENST00000541005 PI4KAP42356 2102 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 TNRC6BQ9UPQ9 1833 aaKnown RBP13.63□□□□□ -0.23
LTBR-208ENST00000541005 TBC1D3BA6NDS4 549 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 HOXD9P28356 352 aaPredicted RBP13.63□□□□□ -0.23
LTBR-208ENST00000541005 SLC11A2P49281 568 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 DGKGP49619 791 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 DMC1Q14565 340 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 MPPE1Q53F39 396 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 DCAF6Q58WW2 860 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 C10orf76Q5T2E6 689 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 MPP7Q5T2T1 576 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 NAA35Q5VZE5 725 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 OR6B2Q6IFH4 312 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 WDR5BQ86VZ2 330 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 LONP2Q86WA8 852 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 ERICH1Q86X53 443 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 XYLT1Q86Y38 959 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 DEFB106AQ8N104 65 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 IL17RCQ8NAC3 791 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 ADAM32Q8TC27 787 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 BAP1Q92560 729 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 NAP1L5Q96NT1 182 aaPredicted RBP13.63□□□□□ -0.23
LTBR-208ENST00000541005 RRN3Q9NYV6 651 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 HCN2Q9UL51 889 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 SLC8A2Q9UPR5 921 aa13.63□□□□□ -0.23
LTBR-208ENST00000541005 GON4LQ3T8J9 2241 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 ANTXRLA6NF34 631 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 TRIM24O15164 1050 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 ACSL4O60488 711 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 APOEP02649 317 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 MMP8P22894 467 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 SLC6A4P31645 630 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 CNR2P34972 360 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 MATKP42679 507 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 SEC13P55735 322 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 GSCP56915 257 aaPredicted RBP13.62□□□□□ -0.23
LTBR-208ENST00000541005 TPM4P67936 248 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 PITX1P78337 314 aaPredicted RBP13.62□□□□□ -0.23
LTBR-208ENST00000541005 CDK17Q00537 523 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 DMWDQ09019 674 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 MTA1Q13330 715 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 NR1I3Q14994 352 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 C2orf27AQ580R0 203 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 NADSYN1Q6IA69 706 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 ARCQ7LC44 396 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 ASCL5Q7RTU5 278 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 CACNA2D4Q7Z3S7 1137 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 TRMT11Q7Z4G4 463 aaKnown RBP13.62□□□□□ -0.23
LTBR-208ENST00000541005 ALLCQ8N6M5 410 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 SUMF1Q8NBK3 374 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 BHMTQ93088 406 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 NT5C3BQ969T7 300 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 DDX50Q9BQ39 737 aaKnown RBP13.62□□□□□ -0.23
LTBR-208ENST00000541005 TTYH3Q9C0H2 523 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 TMEM51Q9NW97 253 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 PLK2Q9NYY3 685 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 EBF1Q9UH73 591 aa13.62□□□□□ -0.23
LTBR-208ENST00000541005 CEP250Q9BV73 2442 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 KCNU1A8MYU2 1149 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 PRRT4C9JH25 899 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 GFRA3O60609 400 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 ADAM23O75077 832 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 GRAP2O75791 330 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 KLF8O95600 359 aaPredicted RBP13.61□□□□□ -0.23
LTBR-208ENST00000541005 APBB3O95704 486 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 SERPINC1P01008 464 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 LMNAP02545 664 aaKnown RBP13.61□□□□□ -0.23
LTBR-208ENST00000541005 CCDC172P0C7W6 258 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 SLC2A3P11169 496 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 UNGP13051 313 aaPredicted RBP13.61□□□□□ -0.23
LTBR-208ENST00000541005 FERP16591 822 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 NOS2P35228 1153 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 FNTBP49356 437 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 DGKEP52429 567 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 CENPCQ03188 943 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 EIF4HQ15056 248 aaKnown RBP13.61□□□□□ -0.23
LTBR-208ENST00000541005 CRY1Q16526 586 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 FIGNQ5HY92 759 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 EOGTQ5NDL2 527 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 PIK3R6Q5UE93 754 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 OTUD1Q5VV17 481 aaPredicted RBP13.61□□□□□ -0.23
LTBR-208ENST00000541005 ANKS1BQ7Z6G8 1248 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 ALYREFQ86V81 257 aaKnown RBP13.61□□□□□ -0.23
LTBR-208ENST00000541005 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.61□□□□□ -0.23
LTBR-208ENST00000541005 ZNF513Q8N8E2 541 aaPredicted RBP13.61□□□□□ -0.23
LTBR-208ENST00000541005 HJURPQ8NCD3 748 aaPredicted RBP13.61□□□□□ -0.23
LTBR-208ENST00000541005 DDI1Q8WTU0 396 aa13.61□□□□□ -0.23
LTBR-208ENST00000541005 CPA5Q8WXQ8 436 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms