RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 C15orf59Q2T9L4 293 aaPredicted RBP16.1■□□□□ 0.17
DDB1-218ENST00000540784 LY6G5CQ5SRR4 150 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 IER5LQ5T953 404 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 RALGPS2Q86X27 583 aaPredicted RBP16.1■□□□□ 0.17
DDB1-218ENST00000540784 TMEM25Q86YD3 366 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 CTNNBL1Q8WYA6 563 aaPredicted RBP16.1■□□□□ 0.17
DDB1-218ENST00000540784 BTN2A3PQ96KV6 586 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 CNPY3Q9BT09 278 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 ARHGEF3Q9NR81 526 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 PIGVQ9NUD9 493 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 CALCOCO1Q9P1Z2 691 aa16.1■□□□□ 0.17
DDB1-218ENST00000540784 KRBA1A5PL33 1030 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 MAN2B1O00754 1011 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 CYP17A1P05093 508 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 GJA4P35212 333 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 GAD2Q05329 585 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 CDO1Q16878 200 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 ANO4Q32M45 955 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 BRMS1LQ5PSV4 323 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 SH3PXD2AQ5TCZ1 1133 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 OTUD1Q5VV17 481 aaPredicted RBP16.09■□□□□ 0.17
DDB1-218ENST00000540784 C1orf228Q6PIY5 440 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 ZNF852Q6ZMS4 543 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 TPGS1Q6ZTW0 290 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 TPRG1Q6ZUI0 275 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 STRADAQ7RTN6 431 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 CPXM2Q8N436 756 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 CENPIQ92674 756 aaPredicted RBP16.09■□□□□ 0.17
DDB1-218ENST00000540784 TMA16Q96EY4 203 aaKnown RBP16.09■□□□□ 0.17
DDB1-218ENST00000540784 MSANTD3Q96H12 275 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 ADAM33Q9BZ11 813 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 STOML2Q9UJZ1 356 aa16.09■□□□□ 0.17
DDB1-218ENST00000540784 VCANP13611 3396 aa16.08■□□□□ 0.17
DDB1-218ENST00000540784 GOLGA6L7A0A1B0GV03 622 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 TMEM221A6NGB7 291 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 SOWAHDA6NJG2 315 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 EIF3CLB5ME19 914 aaKnown RBP16.08■□□□□ 0.16
DDB1-218ENST00000540784 SPECC1L-ADORA2AF8WAN1 911 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 M0R296 226 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 IPO7O95373 1038 aaKnown RBP16.08■□□□□ 0.16
DDB1-218ENST00000540784 LCA5LO95447 670 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 CYBBP04839 570 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 TMEM253P0C7T8 217 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 ADH5P11766 374 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 PSMA2P25787 234 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 SOX9P48436 509 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 STARD6P59095 220 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 BNIPLQ7Z465 357 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 FAM217AQ8IXS0 508 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 FAM172AQ8WUF8 416 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 FAM3CQ92520 227 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 EXOC4Q96A65 974 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 ARHGEF26Q96DR7 871 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 NELL2Q99435 816 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 EIF3CQ99613 913 aaKnown RBP16.08■□□□□ 0.16
DDB1-218ENST00000540784 NUP85Q9BW27 656 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 BBS2Q9BXC9 721 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 PACSIN1Q9BY11 444 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 TKTL2Q9H0I9 626 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 MFSD1Q9H3U5 465 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 LUC7LQ9NQ29 371 aaKnown RBP16.08■□□□□ 0.16
DDB1-218ENST00000540784 INTUQ9ULD6 942 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 PCDHA13Q9Y5I0 950 aa16.08■□□□□ 0.16
DDB1-218ENST00000540784 TRDMT1O14717 391 aaKnown RBP16.07■□□□□ 0.16
DDB1-218ENST00000540784 TSPAN3O60637 253 aa16.07■□□□□ 0.16
DDB1-218ENST00000540784 RNF8O76064 485 aa16.07■□□□□ 0.16
DDB1-218ENST00000540784 NDUFA10O95299 355 aa16.07■□□□□ 0.16
DDB1-218ENST00000540784 CD72P21854 359 aa16.07■□□□□ 0.16
DDB1-218ENST00000540784 CTHP32929 405 aa16.07■□□□□ 0.16
DDB1-218ENST00000540784 ATXN1P54253 815 aaKnown RBP16.07■□□□□ 0.16
DDB1-218ENST00000540784 VCPP55072 806 aaKnown RBP16.07■□□□□ 0.16
DDB1-218ENST00000540784 OGDHQ02218 1023 aa16.07■□□□□ 0.16
DDB1-218ENST00000540784 ARL13BQ3SXY8 428 aa16.07■□□□□ 0.16
DDB1-218ENST00000540784 MPPE1Q53F39 396 aa16.07■□□□□ 0.16
DDB1-218ENST00000540784 SCYL2Q6P3W7 929 aa16.07■□□□□ 0.16
DDB1-218ENST00000540784 FNIP1Q8TF40 1166 aa16.07■□□□□ 0.16
DDB1-218ENST00000540784 DDI1Q8WTU0 396 aa16.07■□□□□ 0.16
DDB1-218ENST00000540784 IRX2Q9BZI1 471 aaPredicted RBP16.07■□□□□ 0.16
DDB1-218ENST00000540784 ARHGEF38Q9NXL2 777 aa16.07■□□□□ 0.16
DDB1-218ENST00000540784 CTTNBP2NLQ9P2B4 639 aa16.07■□□□□ 0.16
DDB1-218ENST00000540784 UVRAGQ9P2Y5 699 aa16.07■□□□□ 0.16
DDB1-218ENST00000540784 XPO7Q9UIA9 1087 aaKnown RBP16.07■□□□□ 0.16
DDB1-218ENST00000540784 MRPS17Q9Y2R5 130 aaKnown RBP16.07■□□□□ 0.16
DDB1-218ENST00000540784 HELZP42694 1942 aaKnown RBP16.06■□□□□ 0.16
DDB1-218ENST00000540784 NEDD8-MDP1E9PL57 170 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 MYO1FO00160 1098 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 HOXC11O43248 304 aaPredicted RBP16.06■□□□□ 0.16
DDB1-218ENST00000540784 CCP110O43303 1012 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 PAGE1O75459 146 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 TYRP14679 529 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 ADRA1BP35368 520 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 GALK1P51570 392 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 HDAC4P56524 1084 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 RAB6CQ53S08 254 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 FAM133BQ5BKY9 247 aaKnown RBP16.06■□□□□ 0.16
DDB1-218ENST00000540784 ACBD5Q5T8D3 534 aaPredicted RBP16.06■□□□□ 0.16
DDB1-218ENST00000540784 RAP1GAP2Q684P5 730 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 NADSYN1Q6IA69 706 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 RFWD3Q6PCD5 774 aa16.06■□□□□ 0.16
DDB1-218ENST00000540784 RAD9BQ6WBX8 426 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms