RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 COX16Q9P0S2 106 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 FETUBQ9UGM5 382 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 NOVA2Q9UNW9 492 aaKnown RBP17.74■□□□□ 0.43
LTBR-207ENST00000539925 PTPRDP23468 1912 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 ABHD14A-ACY1A0A1B0GW23 586 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 E7EVH7 732 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 IRAK2O43187 625 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 CDH16O75309 829 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 CCR1P32246 355 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 FDFT1P37268 417 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 GLUD2P49448 558 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 CCL23P55773 120 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 RPL10AP62906 217 aaKnown RBP17.74■□□□□ 0.43
LTBR-207ENST00000539925 PPP2R2AP63151 447 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 SARNPP82979 210 aaKnown RBP17.74■□□□□ 0.43
LTBR-207ENST00000539925 GBE1Q04446 702 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 PPP2R5DQ14738 602 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 RASA2Q15283 850 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 KCTD19Q17RG1 926 aaPredicted RBP17.74■□□□□ 0.43
LTBR-207ENST00000539925 MSANTD2Q6P1R3 559 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 FBXO46Q6PJ61 603 aaPredicted RBP17.74■□□□□ 0.43
LTBR-207ENST00000539925 LEKR1Q6ZMV7 388 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 CTU1Q7Z7A3 348 aaKnown RBP17.74■□□□□ 0.43
LTBR-207ENST00000539925 TAC4Q86UU9 113 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 CEP57Q86XR8 500 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 CNPY4Q8N129 248 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 EDEM1Q92611 657 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 LRRC39Q96DD0 335 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 SCLYQ96I15 445 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 ZNF333Q96JL9 665 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 GPR62Q9BZJ7 368 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 OLA1Q9NTK5 396 aaKnown RBP17.74■□□□□ 0.43
LTBR-207ENST00000539925 ARHGEF38Q9NXL2 777 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 DONSONQ9NYP3 566 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 XPO7Q9UIA9 1087 aaKnown RBP17.74■□□□□ 0.43
LTBR-207ENST00000539925 PATJQ8NI35 1801 aa17.74■□□□□ 0.43
LTBR-207ENST00000539925 DCLK1O15075 740 aa17.73■□□□□ 0.43
LTBR-207ENST00000539925 CREB3O43889 395 aa17.73■□□□□ 0.43
LTBR-207ENST00000539925 TBC1D4O60343 1298 aa17.73■□□□□ 0.43
LTBR-207ENST00000539925 OPHN1O60890 802 aa17.73■□□□□ 0.43
LTBR-207ENST00000539925 MNX1P50219 401 aaPredicted RBP17.73■□□□□ 0.43
LTBR-207ENST00000539925 ZNF33AQ06730 810 aa17.73■□□□□ 0.43
LTBR-207ENST00000539925 PDIA2Q13087 525 aaKnown RBP17.73■□□□□ 0.43
LTBR-207ENST00000539925 NR1H3Q13133 447 aa17.73■□□□□ 0.43
LTBR-207ENST00000539925 EIF4EBP2Q13542 120 aaPredicted RBP17.73■□□□□ 0.43
LTBR-207ENST00000539925 KCNJ11Q14654 390 aa17.73■□□□□ 0.43
LTBR-207ENST00000539925 PYROXD2Q8N2H3 581 aa17.73■□□□□ 0.43
LTBR-207ENST00000539925 PYROXD1Q8WU10 500 aa17.73■□□□□ 0.43
LTBR-207ENST00000539925 HTR3CQ8WXA8 447 aa17.73■□□□□ 0.43
LTBR-207ENST00000539925 TKTL2Q9H0I9 626 aa17.73■□□□□ 0.43
LTBR-207ENST00000539925 RAB6BQ9NRW1 208 aa17.73■□□□□ 0.43
LTBR-207ENST00000539925 TMEM39AQ9NV64 488 aa17.73■□□□□ 0.43
LTBR-207ENST00000539925 TLDC2A0PJX2 215 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 FAM92AA1XBS5 289 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 MYCP01106 439 aaPredicted RBP17.72■□□□□ 0.43
LTBR-207ENST00000539925 CLTBP09497 229 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 CPB1P15086 417 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 TPSB2P20231 275 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 PRKD1Q15139 912 aaPredicted RBP17.72■□□□□ 0.43
LTBR-207ENST00000539925 TPSAB1Q15661 275 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 DNAJC21Q5F1R6 531 aaKnown RBP17.72■□□□□ 0.43
LTBR-207ENST00000539925 TNFAIP8L3Q5GJ75 292 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 ARHGEF18Q6ZSZ5 1173 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 TDRPQ86YL5 185 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 SH2D3CQ8N5H7 860 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 SCAMP5Q8TAC9 235 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 ZBTB9Q96C00 473 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 ARMC5Q96C12 935 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 PPP1R12CQ9BZL4 782 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 CLIC5Q9NZA1 410 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 LGALS13Q9UHV8 139 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 BACE2Q9Y5Z0 518 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 NLRC5Q86WI3 1866 aa17.72■□□□□ 0.43
LTBR-207ENST00000539925 A0A0A0MRY4 1105 aa17.71■□□□□ 0.43
LTBR-207ENST00000539925 FGF10O15520 208 aaPredicted RBP17.71■□□□□ 0.43
LTBR-207ENST00000539925 OR4Q2P0C623 313 aa17.71■□□□□ 0.43
LTBR-207ENST00000539925 MAGOHP61326 146 aaKnown RBP17.71■□□□□ 0.43
LTBR-207ENST00000539925 COG7P83436 770 aa17.71■□□□□ 0.43
LTBR-207ENST00000539925 NRG1Q02297 640 aaPredicted RBP17.71■□□□□ 0.43
LTBR-207ENST00000539925 SLC10A2Q12908 348 aaPredicted RBP17.71■□□□□ 0.43
LTBR-207ENST00000539925 USP41Q3LFD5 358 aa17.71■□□□□ 0.43
LTBR-207ENST00000539925 ZNF771Q7L3S4 317 aaPredicted RBP17.71■□□□□ 0.43
LTBR-207ENST00000539925 ZBED8Q8IZ13 594 aa17.71■□□□□ 0.43
LTBR-207ENST00000539925 LZTR1Q8N653 840 aa17.71■□□□□ 0.43
LTBR-207ENST00000539925 C9orf72Q96LT7 481 aa17.71■□□□□ 0.43
LTBR-207ENST00000539925 SPATA13Q96N96 652 aa17.71■□□□□ 0.43
LTBR-207ENST00000539925 C10orf88Q9H8K7 445 aa17.71■□□□□ 0.43
LTBR-207ENST00000539925 ETNK2Q9NVF9 386 aa17.71■□□□□ 0.43
LTBR-207ENST00000539925 FNIP2Q9P278 1114 aa17.71■□□□□ 0.43
LTBR-207ENST00000539925 HSFX1Q9UBD0 423 aa17.71■□□□□ 0.43
LTBR-207ENST00000539925 OR12D3Q9UGF7 316 aa17.71■□□□□ 0.43
LTBR-207ENST00000539925 GSTA2P09210 222 aa17.71■□□□□ 0.42
LTBR-207ENST00000539925 ERCC2P18074 760 aa17.71■□□□□ 0.42
LTBR-207ENST00000539925 YWHAQP27348 245 aa17.71■□□□□ 0.42
LTBR-207ENST00000539925 GJA8P48165 433 aa17.71■□□□□ 0.42
LTBR-207ENST00000539925 RABGGTBP53611 331 aa17.71■□□□□ 0.42
LTBR-207ENST00000539925 AUHQ13825 339 aaKnown RBP17.71■□□□□ 0.42
LTBR-207ENST00000539925 CCDC38Q502W7 563 aa17.71■□□□□ 0.42
LTBR-207ENST00000539925 DENND5BQ6ZUT9 1274 aa17.71■□□□□ 0.42
LTBR-207ENST00000539925 DEFB128Q7Z7B8 93 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms