RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 MBL2P11226 248 aaPredicted RBP15.97■□□□□ 0.15
VAMP1-207ENST00000539047 HARS2P49590 506 aaKnown RBP15.97■□□□□ 0.15
VAMP1-207ENST00000539047 PGFP49763 221 aa15.97■□□□□ 0.15
VAMP1-207ENST00000539047 C8orf74Q6P047 294 aa15.97■□□□□ 0.15
VAMP1-207ENST00000539047 AADACL2Q6P093 401 aa15.97■□□□□ 0.15
VAMP1-207ENST00000539047 ADAT2Q7Z6V5 191 aaKnown RBP15.97■□□□□ 0.15
VAMP1-207ENST00000539047 ADGRD2Q7Z7M1 963 aa15.97■□□□□ 0.15
VAMP1-207ENST00000539047 MYRIPQ8NFW9 859 aa15.97■□□□□ 0.15
VAMP1-207ENST00000539047 BTN2A3PQ96KV6 586 aa15.97■□□□□ 0.15
VAMP1-207ENST00000539047 AP1M1Q9BXS5 423 aa15.97■□□□□ 0.15
VAMP1-207ENST00000539047 PRKD2Q9BZL6 878 aa15.97■□□□□ 0.15
VAMP1-207ENST00000539047 ATXN3LQ9H3M9 355 aa15.97■□□□□ 0.15
VAMP1-207ENST00000539047 ZNF576Q9H609 170 aa15.97■□□□□ 0.15
VAMP1-207ENST00000539047 CALCOCO1Q9P1Z2 691 aa15.97■□□□□ 0.15
VAMP1-207ENST00000539047 C3orf70A6NLC5 250 aaPredicted RBP15.96■□□□□ 0.15
VAMP1-207ENST00000539047 COCHO43405 550 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 PHF2O75151 1096 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 OAS1P00973 400 aaKnown RBP15.96■□□□□ 0.15
VAMP1-207ENST00000539047 F11P03951 625 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 CKMP06732 381 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 HMBSP08397 361 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 TGM2P21980 687 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 L1CAMP32004 1257 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 CHRNA3P32297 505 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 SLC11A2P49281 568 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 ANKRD20A8PQ5CZ79 823 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 GPR153Q6NV75 609 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 LRRC31Q6UY01 552 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 BBS12Q6ZW61 710 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 TMC8Q8IU68 726 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 CCDC26Q8TAB7 109 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 FAM71BQ8TC56 605 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 SMG7Q92540 1137 aaKnown RBP15.96■□□□□ 0.15
VAMP1-207ENST00000539047 FCRL2Q96LA5 508 aaPredicted RBP15.96■□□□□ 0.15
VAMP1-207ENST00000539047 KCTD15Q96SI1 283 aaPredicted RBP15.96■□□□□ 0.15
VAMP1-207ENST00000539047 DDX50Q9BQ39 737 aaKnown RBP15.96■□□□□ 0.15
VAMP1-207ENST00000539047 OSBPL2Q9H1P3 480 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 SLITRK6Q9H5Y7 841 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 RBM12Q9NTZ6 932 aaKnown RBP15.96■□□□□ 0.15
VAMP1-207ENST00000539047 DONSONQ9NYP3 566 aa15.96■□□□□ 0.15
VAMP1-207ENST00000539047 LSM7Q9UK45 103 aaKnown RBP15.96■□□□□ 0.15
VAMP1-207ENST00000539047 CCDC195A0A1B0GUA6 201 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 EPOPA6NHQ4 379 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 SOBPA7XYQ1 873 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 CST8O60676 142 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 PAGE1O75459 146 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 TADA3O75528 432 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 RFPL2O75678 378 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 CD48P09326 243 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 KRT10P13645 584 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 ARSEP51690 589 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 DYNLT1P63172 113 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 LMNB2Q03252 620 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 LLGL1Q15334 1064 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 TAZQ16635 292 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 CA9Q16790 459 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 BZW1Q7L1Q6 419 aaKnown RBP15.95■□□□□ 0.14
VAMP1-207ENST00000539047 DDX42Q86XP3 938 aaKnown RBP eCLIP15.95■□□□□ 0.14
VAMP1-207ENST00000539047 KLHL7Q8IXQ5 586 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 HS6ST3Q8IZP7 471 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 MMGT1Q8N4V1 131 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 GRK7Q8WTQ7 553 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 MAGOHBQ96A72 148 aaKnown RBP15.95■□□□□ 0.14
VAMP1-207ENST00000539047 SLC39A13Q96H72 371 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 RNF157Q96PX1 679 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 DCLK3Q9C098 648 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 SIK2Q9H0K1 926 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 IGFLR1Q9H665 355 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 CATSPERBQ9H7T0 1116 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 IL21Q9HBE4 155 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 MTMR10Q9NXD2 777 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 LMCD1Q9NZU5 365 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 OR12D3Q9UGF7 316 aa15.95■□□□□ 0.14
VAMP1-207ENST00000539047 FEZ2Q9UHY8 353 aaPredicted RBP15.95■□□□□ 0.14
VAMP1-207ENST00000539047 A0A1W2PRU2 124 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 C2orf78A6NCI8 922 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 KCNU1A8MYU2 1149 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 APOC4-APOC2K7ER74 178 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 MCF2LO15068 1137 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 FGF10O15520 208 aaPredicted RBP15.94■□□□□ 0.14
VAMP1-207ENST00000539047 ZNF189O75820 626 aaPredicted RBP15.94■□□□□ 0.14
VAMP1-207ENST00000539047 TBX18O95935 607 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 IGLV3-27P01718 113 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 APOC2P02655 101 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 RHOP08100 348 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 HDCP19113 662 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 SERPINB6P35237 376 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 HCAR3P49019 387 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 FNTAP49354 379 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 TERF1P54274 439 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 EPHA5P54756 1037 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 CYP4F8P98187 520 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 MMRN1Q13201 1228 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 EIF4EBP2Q13542 120 aaPredicted RBP15.94■□□□□ 0.14
VAMP1-207ENST00000539047 GLE1Q53GS7 698 aaKnown RBP15.94■□□□□ 0.14
VAMP1-207ENST00000539047 ZNF697Q5TEC3 545 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 RFX8Q6ZV50 586 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 MAATS1Q7Z4T9 603 aa15.94■□□□□ 0.14
VAMP1-207ENST00000539047 C12orf50Q8NA57 414 aaPredicted RBP15.94■□□□□ 0.14
VAMP1-207ENST00000539047 P3H4Q92791 437 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms