RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 PAFAH1B3Q15102 231 aaKnown RBP11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 SEPT7Q16181 437 aaKnown RBP11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 TTC39BQ5VTQ0 682 aaPredicted RBP11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 DSTYKQ6XUX3 929 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 UNC5AQ6ZN44 842 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 CYS1Q717R9 158 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 CCDC33Q8N5R6 958 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 C3orf58Q8NDZ4 430 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 ZMIZ2Q8NF64 920 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 APBB2Q92870 758 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 LPPQ93052 612 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 NTAN1Q96AB6 310 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 PCED1BQ96HM7 432 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 LGMNQ99538 433 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 CNGB3Q9NQW8 809 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 TMPRSS4Q9NRS4 437 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 PIGVQ9NUD9 493 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 SLC17A7Q9P2U7 560 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 GGT7Q9UJ14 662 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 CFAP73A6NFT4 308 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 CXorf49A8MYA2 514 aaPredicted RBP11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 HHLA1C9JL84 531 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 LPXNO60711 386 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 OPHN1O60890 802 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 ZNF623O75123 536 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 PGK1P00558 417 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 SNRPAP09012 282 aaKnown RBP11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 CTSHP09668 335 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 MLNP12872 115 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 ETV4P43268 484 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 NCALDP61601 193 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 SARNPP82979 210 aaKnown RBP11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 SCAPQ12770 1279 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 PDK1Q15118 436 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 MFSD14CQ5VZR4 134 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 PPM1NQ8N819 430 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 RNF169Q8NCN4 708 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 PGAP3Q96FM1 320 aaPredicted RBP11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 APOPT1Q96IL0 206 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 AGO3Q9H9G7 860 aaKnown RBP11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 SPC25Q9HBM1 224 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 WDR6Q9NNW5 1121 aaKnown RBP11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 NMRK2Q9NPI5 230 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 EIF2B3Q9NR50 452 aaKnown RBP11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 SMYD2Q9NRG4 433 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 TMEM30AQ9NV96 361 aa11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 TIMM13Q9Y5L4 95 aaPredicted RBP11.79□□□□□ -0.52
SLC28A1-204ENST00000538177 FAM159BA6NKW6 160 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 YJEFN3A6XGL0 299 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 E7ENQ6 273 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 DCLK1O15075 740 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 KRT37O76014 449 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 STK10O94804 968 aaKnown RBP11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 PYGBP11216 843 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 PCSK1P29120 753 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 SCNN1GP51170 649 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 SEMA3BQ13214 749 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 NME3Q13232 169 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 UPP1Q16831 310 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 LGSNQ5TDP6 509 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 CYB5D1Q6P9G0 228 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 RFX8Q6ZV50 586 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 OTOAQ7RTW8 1153 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 CHSY1Q86X52 802 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 SUGP1Q8IWZ8 645 aaKnown RBP11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 CTAGE3PQ8IX95 158 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 MPP5Q8N3R9 675 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 ANKLE1Q8NAG6 615 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 GSDMBQ8TAX9 411 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 TRIB2Q92519 343 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 P2RY11Q96G91 374 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 RRN3Q9NYV6 651 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 PCDHA11Q9Y5I1 949 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 USH1CQ9Y6N9 552 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 TSC2P49815 1807 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 SYNJ2BP-COX16A0A087WUM0 186 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 TRIM49D1C9J1S8 452 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 EEF2KO00418 725 aaKnown RBP11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 CREB3O43889 395 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 ZNF189O75820 626 aaPredicted RBP11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 GRIA1P42261 906 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 HCAR3P49019 387 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 TIGD5Q53EQ6 642 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 STEAP4Q687X5 459 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 DENND5BQ6ZUT9 1274 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 GPRIN1Q7Z2K8 1008 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 COLGALT1Q8NBJ5 622 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 SLC7A14Q8TBB6 771 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 KCNK16Q96T55 309 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 FERMT1Q9BQL6 677 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 C12orf65Q9H3J6 166 aaKnown RBP11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 ECT2Q9H8V3 914 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 CSNK1G1Q9HCP0 422 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 MOCS1Q9NZB8 636 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 COX16Q9P0S2 106 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 FBXW11Q9UKB1 542 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 NR2E3Q9Y5X4 410 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 RAD54BQ9Y620 910 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 MAD1L1Q9Y6D9 718 aa11.78□□□□□ -0.52
SLC28A1-204ENST00000538177 CASTOR2A6NHX0 329 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms