RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 FBXO44Q9H4M3 255 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 GTF3C4Q9UKN8 822 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 MKL2Q9ULH7 1088 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 A0A0A6YYK5 440 aaPredicted RBP11.48□□□□□ -0.57
LINC00346-201ENST00000538077 RBAK-RBAKDNI3L0D1 243 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 CYP2A7P20853 494 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 AMPD2Q01433 879 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 ATP6AP1LQ52LC2 224 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 OLFML2BQ68BL8 750 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 USP50Q70EL3 339 aaPredicted RBP11.48□□□□□ -0.57
LINC00346-201ENST00000538077 BNIPLQ7Z465 357 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 LUZP2Q86TE4 346 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 FIG4Q92562 907 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 PAFAH2Q99487 392 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 EHD4Q9H223 541 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 TRIM66O15016 1216 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 APOA1P02647 267 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 KCNA3P22001 575 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 PSMA4P25789 261 aaKnown RBP11.48□□□□□ -0.57
LINC00346-201ENST00000538077 MAPK1P28482 360 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 MRPS15P82914 257 aaKnown RBP11.48□□□□□ -0.57
LINC00346-201ENST00000538077 LRRC8BQ6P9F7 803 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 KIAA2013Q8IYS2 634 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 OLFM3Q96PB7 478 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 CRYL1Q9Y2S2 319 aa11.48□□□□□ -0.57
LINC00346-201ENST00000538077 C16orf96A6NNT2 1141 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 EIF2S1P05198 315 aaKnown RBP11.47□□□□□ -0.57
LINC00346-201ENST00000538077 PYGMP11217 842 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 ATP6V1C1P21283 382 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 PKN1Q16512 942 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 SHROOM1Q2M3G4 852 aaPredicted RBP11.47□□□□□ -0.57
LINC00346-201ENST00000538077 DEFB106AQ8N104 65 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 ZNF786Q8N393 782 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 TRPC4APQ8TEL6 797 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 CAMKK2Q96RR4 588 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 CCT7Q99832 543 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 NLNQ9BYT8 704 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 ACTR8Q9H981 624 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC00346-201ENST00000538077 GEMIN8Q9NWZ8 242 aaKnown RBP11.47□□□□□ -0.57
LINC00346-201ENST00000538077 HEY2Q9UBP5 337 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 ZNHIT2Q9UHR6 403 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 IGSF6O95976 241 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 CLK1P49759 484 aaKnown RBP11.47□□□□□ -0.57
LINC00346-201ENST00000538077 EARS2Q5JPH6 523 aaKnown RBP11.47□□□□□ -0.57
LINC00346-201ENST00000538077 ZNF697Q5TEC3 545 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 TMEM159Q96B96 161 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 KCTD14Q9BQ13 255 aaPredicted RBP11.47□□□□□ -0.57
LINC00346-201ENST00000538077 KIAA1683Q9H0B3 1180 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 EXO5Q9H790 373 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 HAO1Q9UJM8 370 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 SLC9A8Q9Y2E8 581 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 NT5C1B-RDH14C9J2C7 533 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 EIF3HO15372 352 aaKnown RBP eCLIP11.47□□□□□ -0.57
LINC00346-201ENST00000538077 SLITRK3O94933 977 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 GJB1P08034 283 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 SLURP2P0DP57 97 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 ATP6V1B1P15313 513 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 CCR4P51679 360 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 CSNK2BP67870 215 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 TRAF2Q12933 501 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 FBXL19Q6PCT2 694 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 SETD3Q86TU7 594 aaPredicted RBP11.47□□□□□ -0.57
LINC00346-201ENST00000538077 EXD1Q8NHP7 514 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 RUBCNQ92622 972 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 SYN2Q92777 582 aaPredicted RBP11.47□□□□□ -0.57
LINC00346-201ENST00000538077 SGSM3Q96HU1 749 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 ALBP02768 609 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 BCL2L1Q07817 233 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 XRCC4Q13426 336 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 RAP1GAP2Q684P5 730 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 POTEAQ6S8J7 498 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 NPNTQ6UXI9 565 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 NECAB2Q7Z6G3 386 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 TRAPPC5Q8IUR0 188 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 LRRC34Q8IZ02 419 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 TMEM199Q8N511 208 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 NAT16Q8N8M0 369 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 USP7Q93009 1102 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 CNPY3Q9BT09 278 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 DPP7Q9UHL4 492 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 BUD23O43709 281 aaKnown RBP11.47□□□□□ -0.57
LINC00346-201ENST00000538077 HSMCR30P0CW71 290 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 PCYT1AP49585 367 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 EIF2B5Q13144 721 aaKnown RBP11.47□□□□□ -0.57
LINC00346-201ENST00000538077 CEP78Q5JTW2 689 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 SPATA20Q8TB22 786 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 TADA1Q96BN2 335 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 VTA1Q9NP79 307 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 MCM8Q9UJA3 840 aa11.47□□□□□ -0.57
LINC00346-201ENST00000538077 TBL1XO60907 577 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 TYMPP19971 482 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 SLC26A2P50443 739 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 PLPP4Q5VZY2 271 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 HLA-DQA1Q5Y7H0 255 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 PDPK2PQ6A1A2 396 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 SV2AQ7L0J3 742 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 CYP4X1Q8N118 509 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 CXorf40AQ8TE69 158 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 APBA2Q99767 749 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms