RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 AP1G2O75843 785 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 GRIA1P42261 906 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 MAGEA3P43357 314 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 FLT3LGP49771 235 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 HHATQ5VTY9 493 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 MFSD14CQ5VZR4 134 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 C4orf22Q6V702 233 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 FAM35AQ86V20 835 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 PSTKQ8IV42 348 aaKnown RBP13.82□□□□□ -0.2
VPS33B-202ENST00000535906 HACE1Q8IYU2 909 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 TMEM86AQ8N2M4 240 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 BANPQ8N9N5 519 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 MCUQ8NE86 351 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 ADAM32Q8TC27 787 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 RNF139Q8WU17 664 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 TFB1MQ8WVM0 346 aaKnown RBP13.82□□□□□ -0.2
VPS33B-202ENST00000535906 HTR3CQ8WXA8 447 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 TRIM56Q9BRZ2 755 aaKnown RBP13.82□□□□□ -0.2
VPS33B-202ENST00000535906 UPF3AQ9H1J1 476 aaKnown RBP13.82□□□□□ -0.2
VPS33B-202ENST00000535906 PNPLA8Q9NP80 782 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 RCOR3Q9P2K3 495 aaPredicted RBP13.82□□□□□ -0.2
VPS33B-202ENST00000535906 STAP1Q9ULZ2 295 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 GIT1Q9Y2X7 761 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 USH1CQ9Y6N9 552 aa13.82□□□□□ -0.2
VPS33B-202ENST00000535906 I3L4J1 428 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 CREB3O43889 395 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 FAM155BO75949 473 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 TOMM70O94826 608 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 UNC5CO95185 931 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 MYCNP04198 464 aaPredicted RBP13.81□□□□□ -0.2
VPS33B-202ENST00000535906 ALADP13716 330 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 IBSPP21815 317 aaPredicted RBP13.81□□□□□ -0.2
VPS33B-202ENST00000535906 CD52P31358 61 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 GBP2P32456 591 aaPredicted RBP13.81□□□□□ -0.2
VPS33B-202ENST00000535906 THPOP40225 353 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 DAOAP59103 153 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 DEUP1Q05D60 604 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 FAAP100Q0VG06 881 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 UPP1Q16831 310 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 TIGD5Q53EQ6 642 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 TCP10LQ8TDR4 215 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 SERAC1Q96JX3 654 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 RHOBTB2Q9BYZ6 727 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 SPC25Q9HBM1 224 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 ANLNQ9NQW6 1124 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 PADI3Q9ULW8 664 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 IKBKGQ9Y6K9 419 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 CXorf49A8MYA2 514 aaPredicted RBP13.81□□□□□ -0.2
VPS33B-202ENST00000535906 F5H423 210 aaPredicted RBP13.81□□□□□ -0.2
VPS33B-202ENST00000535906 I6L893 689 aaPredicted RBP13.81□□□□□ -0.2
VPS33B-202ENST00000535906 GPR182O15218 404 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 ADAMTS4O75173 837 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 AMHP03971 560 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 ASGR1P07306 291 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 INHBAP08476 426 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 KRT16P08779 473 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 USP17L7P0C7H9 530 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 EZRP15311 586 aaKnown RBP13.81□□□□□ -0.2
VPS33B-202ENST00000535906 ADRA1DP25100 572 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 SETDB1Q15047 1291 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 PAN2Q504Q3 1202 aaKnown RBP13.81□□□□□ -0.2
VPS33B-202ENST00000535906 ANKRD20A2Q5SQ80 823 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 ANKRD20A1Q5TYW2 823 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 ANKRD20A3Q5VUR7 823 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 DENND5BQ6ZUT9 1274 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 MPP5Q8N3R9 675 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 KIF2BQ8N4N8 673 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 SLC7A14Q8TBB6 771 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 SIGLEC10Q96LC7 697 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 TACO1Q9BSH4 297 aaKnown RBP13.81□□□□□ -0.2
VPS33B-202ENST00000535906 YY1AP1Q9H869 796 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 SLC17A7Q9P2U7 560 aa13.81□□□□□ -0.2
VPS33B-202ENST00000535906 IQANK1A0A1B0GTG1 560 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 FAM72CH0Y354 149 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 CAPN9O14815 690 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 SEPT4O43236 478 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 CA12O43570 354 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 POMCP01189 267 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 TPSB2P20231 275 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 SEMA5AQ13591 1074 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 TPSAB1Q15661 275 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 RAB41Q5JT25 222 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 FAM72AQ5TYM5 149 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 FAM72DQ6L9T8 149 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 MRPL10Q7Z7H8 261 aaKnown RBP13.8□□□□□ -0.2
VPS33B-202ENST00000535906 FAM72BQ86X60 149 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 TP53INP2Q8IXH6 220 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 ZNF75CPQ92670 426 aaPredicted RBP13.8□□□□□ -0.2
VPS33B-202ENST00000535906 ALKBH8Q96BT7 664 aaKnown RBP13.8□□□□□ -0.2
VPS33B-202ENST00000535906 THOC1Q96FV9 657 aaKnown RBP13.8□□□□□ -0.2
VPS33B-202ENST00000535906 RTP3Q9BQQ7 232 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 MYLK2Q9H1R3 596 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 WDR6Q9NNW5 1121 aaKnown RBP13.8□□□□□ -0.2
VPS33B-202ENST00000535906 TXLNGQ9NUQ3 528 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 CHKBQ9Y259 395 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 HACD1B0YJ81 288 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 HHLA1C9JL84 531 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 HGSO14964 777 aaPredicted RBP13.8□□□□□ -0.2
VPS33B-202ENST00000535906 TM9SF1O15321 606 aa13.8□□□□□ -0.2
VPS33B-202ENST00000535906 ATP5HO75947 161 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms