RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 OSBPL2Q9H1P3 480 aa13.85□□□□□ -0.19
BEST1-208ENST00000534553 PCDHB5Q9Y5E4 795 aa13.85□□□□□ -0.19
BEST1-208ENST00000534553 PATJQ8NI35 1801 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 SYNJ2BP-COX16A0A087WUM0 186 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 A0A0A0MRY4 1105 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 DCDC2CA8MYV0 355 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 TNFRSF10BO14763 440 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 DCLK1O15075 740 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 CREB3O43889 395 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 YWHAGP61981 247 aaKnown RBP eCLIP13.84□□□□□ -0.19
BEST1-208ENST00000534553 PITX1P78337 314 aaPredicted RBP13.84□□□□□ -0.19
BEST1-208ENST00000534553 ZNF33AQ06730 810 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 SLC10A2Q12908 348 aaPredicted RBP13.84□□□□□ -0.19
BEST1-208ENST00000534553 MRPL58Q14197 206 aaKnown RBP13.84□□□□□ -0.19
BEST1-208ENST00000534553 PRKD1Q15139 912 aaPredicted RBP13.84□□□□□ -0.19
BEST1-208ENST00000534553 SKIDA1Q1XH10 827 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 VARS2Q5ST30 1063 aaKnown RBP13.84□□□□□ -0.19
BEST1-208ENST00000534553 UBAP2Q5T6F2 1119 aaKnown RBP13.84□□□□□ -0.19
BEST1-208ENST00000534553 BTBD8Q5XKL5 378 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 PALM2Q8IXS6 379 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 PYROXD2Q8N2H3 581 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 C2orf15Q8WU43 125 aaKnown RBP13.84□□□□□ -0.19
BEST1-208ENST00000534553 SPATA13Q96N96 652 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 TOX2Q96NM4 488 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 DEFB118Q96PH6 123 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 SMOC2Q9H3U7 446 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 XAB2Q9HCS7 855 aaKnown RBP13.84□□□□□ -0.19
BEST1-208ENST00000534553 EIF2B3Q9NR50 452 aaKnown RBP13.84□□□□□ -0.19
BEST1-208ENST00000534553 COMMD8Q9NX08 183 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 EURLQ9NYK6 297 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 COX16Q9P0S2 106 aa13.84□□□□□ -0.19
BEST1-208ENST00000534553 PRG3Q9Y2Y8 225 aaPredicted RBP13.84□□□□□ -0.19
BEST1-208ENST00000534553 GOLGA8MH3BSY2 632 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 H7C4K7 107 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 IFI35P80217 286 aaPredicted RBP13.83□□□□□ -0.2
BEST1-208ENST00000534553 SEMA5AQ13591 1074 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 C1orf53Q5VUE5 145 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 EXOC3L1Q86VI1 746 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 SPATS2Q86XZ4 545 aaKnown RBP13.83□□□□□ -0.2
BEST1-208ENST00000534553 NUP93Q8N1F7 819 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 LRRC43Q8N309 656 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 DQX1Q8TE96 717 aaKnown RBP13.83□□□□□ -0.2
BEST1-208ENST00000534553 CEP295NLQ96MC4 621 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 CASD1Q96PB1 797 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 HAPLN3Q96S86 360 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 TMEM209Q96SK2 561 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 RHOBTB2Q9BYZ6 727 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 TKTL2Q9H0I9 626 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 ACSS3Q9H6R3 686 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 PSMC3IPQ9P2W1 217 aaPredicted RBP13.83□□□□□ -0.2
BEST1-208ENST00000534553 DNAJB4Q9UDY4 337 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 SCML2Q9UQR0 700 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.83□□□□□ -0.2
BEST1-208ENST00000534553 CLUHO75153 1309 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 PTPRDP23468 1912 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 IRAK2O43187 625 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 MFSD11O43934 449 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 B4GALT3O60512 393 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 MLNP12872 115 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 FGFR3P22607 806 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 CCR1P32246 355 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 PSEN1P49768 467 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 GEMIN4P57678 1058 aaKnown RBP13.83□□□□□ -0.2
BEST1-208ENST00000534553 EIF4EBP2Q13542 120 aaPredicted RBP13.83□□□□□ -0.2
BEST1-208ENST00000534553 PPP2R5DQ14738 602 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 GPNMBQ14956 572 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 FASTKD3Q14CZ7 662 aaKnown RBP13.83□□□□□ -0.2
BEST1-208ENST00000534553 CTXN3Q4LDR2 81 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 FNBP1LQ5T0N5 605 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 ACBD5Q5T8D3 534 aaPredicted RBP13.83□□□□□ -0.2
BEST1-208ENST00000534553 TAC4Q86UU9 113 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 MON1AQ86VX9 555 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 FBXO36Q8NEA4 188 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 SPPL2BQ8TCT7 592 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 EDEM1Q92611 657 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 RNF34Q969K3 372 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 SERPINB11Q96P15 392 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 SELENOSQ9BQE4 189 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 CCDC134Q9H6E4 229 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 INTS9Q9NV88 658 aaKnown RBP13.83□□□□□ -0.2
BEST1-208ENST00000534553 ARHGEF38Q9NXL2 777 aa13.83□□□□□ -0.2
BEST1-208ENST00000534553 NLRC5Q86WI3 1866 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 CARNS1A5YM72 827 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 GMNCA6NCL1 334 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 F8W810 466 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 NDUFAB1O14561 156 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 PQBP1O60828 265 aaKnown RBP13.82□□□□□ -0.2
BEST1-208ENST00000534553 RTN3O95197 1032 aaPredicted RBP13.82□□□□□ -0.2
BEST1-208ENST00000534553 FAM107AO95990 144 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 APRTP07741 180 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 SLC2A3P11169 496 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 ERCC2P18074 760 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 STX2P32856 288 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 SLC18A1P54219 525 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 MTA1Q13330 715 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 BBS9Q3SYG4 887 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 C3orf62Q6ZUJ4 267 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 ANKS3Q6ZW76 656 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 CCDC13Q8IYE1 715 aa13.82□□□□□ -0.2
BEST1-208ENST00000534553 CRIPAKQ8N1N5 446 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms