RNA–Protein interactions for RNA: ENST00000534070.5

CHEK1-216, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-216ENST00000534070 LAMP2P13473 410 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 PTPRAP18433 802 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 TGM1P22735 817 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 GBP1P32455 592 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 LSP1P33241 339 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 BCAT1P54687 386 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 BCAR1P56945 870 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 GMFBP60983 142 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 PMP22Q01453 160 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 TRIM32Q13049 653 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 CYP2A13Q16696 494 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 HSP90AA5PQ58FG0 334 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 RAP1GAP2Q684P5 730 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 HHIPL2Q6UWX4 724 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 LRIG3Q6UXM1 1119 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 KIF6Q6ZMV9 814 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 ZNF687Q8N1G0 1237 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 DTNBP1Q96EV8 351 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 TCF25Q9BQ70 676 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 MAK16Q9BXY0 300 aaKnown RBP6.44□□□□□ -1.38
CHEK1-216ENST00000534070 LRRCC1Q9C099 1032 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 ABCG8Q9H221 673 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 TLR8Q9NR97 1041 aaKnown RBP6.44□□□□□ -1.38
CHEK1-216ENST00000534070 SELENONQ9NZV5 590 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 MRPL15Q9P015 296 aaKnown RBP6.44□□□□□ -1.38
CHEK1-216ENST00000534070 SAMM50Q9Y512 469 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 DICER1Q9UPY3 1922 aaKnown RBP6.44□□□□□ -1.38
CHEK1-216ENST00000534070 IGSF1Q8N6C5 1336 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 ATXN2Q99700 1313 aaKnown RBP6.44□□□□□ -1.38
CHEK1-216ENST00000534070 CACNA1FO60840 1977 aa6.44□□□□□ -1.38
CHEK1-216ENST00000534070 PNMA6EA0A0J9YXQ4 647 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 PGRMC2O15173 223 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 ST18O60284 1047 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 GSTP1P09211 210 aaKnown RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 SPARCP09486 303 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 TMIGD3P0DMS9 266 aaPredicted RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 NFKBIAP25963 317 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 ALDH1B1P30837 517 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 ACAA2P42765 397 aaKnown RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 PAFAH1B1P43034 410 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 ZNF143P52747 638 aaPredicted RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 LRRC14Q15048 493 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 KRT71Q3SY84 523 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 NAIF1Q69YI7 327 aaPredicted RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 B3GNT6Q6ZMB0 384 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 DGLUCYQ7Z3D6 616 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 PPP1R3BQ86XI6 285 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 RBM12BQ8IXT5 1001 aaKnown RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 EHBP1Q8NDI1 1231 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 ROBO4Q8WZ75 1007 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 DHX58Q96C10 678 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 NEIL1Q96FI4 390 aaPredicted RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 PDLIM5Q96HC4 596 aaKnown RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 REEP2Q9BRK0 252 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 SIKE1Q9BRV8 207 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 TJP2Q9UDY2 1190 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 TBX20Q9UMR3 447 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 GOLGA6L10A0A0M3HER8 536 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 SCDO00767 359 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 SYN3O14994 580 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 ASAP2O43150 1006 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 RRP8O43159 456 aaKnown RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 CA12O43570 354 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 CTSBP07858 339 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 GSPT1P15170 499 aaKnown RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 LAG3P18627 525 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 BMPR1AP36894 532 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 NPY4RP50391 375 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 ETV1P50549 477 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 GBX2P52951 348 aaPredicted RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 ZRSR1Q15695 479 aaKnown RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 NFIL3Q16649 462 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 CLPPQ16740 277 aaPredicted RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 ZNF792Q3KQV3 632 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 CAPRIN2Q6IMN6 1127 aaKnown RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 TTI2Q6NXR4 508 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 ADGRD1Q6QNK2 874 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 ARHGAP36Q6ZRI8 547 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 CXorf67Q86X51 503 aaPredicted RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 RHOT1Q8IXI2 618 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 PHC2Q8IXK0 858 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 ARHGEF39Q8N4T4 335 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 MB21D1Q8N884 522 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 FANCBQ8NB91 859 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 SUPT20HQ8NEM7 779 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 ERVMER34-1Q9H9K5 563 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 PNPOQ9NVS9 261 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 FBXO40Q9UH90 709 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 ZNF281Q9Y2X9 895 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 OVOS2A0A0G2JMS6 1433 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 PHLPP2Q6ZVD8 1323 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 VPS37CA5D8V6 355 aaPredicted RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 TNPO2O14787 897 aaKnown RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 SRGAP3O43295 1099 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 NOL3O60936 208 aaKnown RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 PENKP01210 267 aaPredicted RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 PECAM1P16284 738 aaPredicted RBP6.43□□□□□ -1.38
CHEK1-216ENST00000534070 EPS15P42566 896 aa6.43□□□□□ -1.38
CHEK1-216ENST00000534070 CAPZA2P47755 286 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms