RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 GOLGA5Q8TBA6 731 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 MYRFLQ96LU7 910 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 ZNF560Q96MR9 790 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 PI4K2AQ9BTU6 479 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 STK33Q9BYT3 514 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 TPSD1Q9BZJ3 242 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 THAP2Q9H0W7 228 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 ACBD3Q9H3P7 528 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 RABEP2Q9H5N1 569 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 TMLHEQ9NVH6 421 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 DPP3Q9NY33 737 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 CALCOCO1Q9P1Z2 691 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 SEL1LQ9UBV2 794 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 MMP17Q9ULZ9 603 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 MAGED2Q9UNF1 606 aaPredicted RBP8.64□□□□□ -1.03
NEDD8-207ENST00000533242 MSRB2Q9Y3D2 182 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 WNT6Q9Y6F9 365 aa8.64□□□□□ -1.03
NEDD8-207ENST00000533242 ADAMTS20P59510 1910 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 ADAMTS9Q9P2N4 1935 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 UPK3BL1B0FP48 263 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 UPK3BL2E5RIL1 263 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 FLT3P36888 993 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 GCLMP48507 274 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 CDR1P51861 262 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 MYL7Q01449 175 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 KCTD16Q68DU8 428 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 AADACL2Q6P093 401 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 SLC39A4Q6P5W5 647 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 EMBQ6PCB8 327 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 DAAM2Q86T65 1068 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 CPNE8Q86YQ8 564 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 SYCP3Q8IZU3 236 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 IQCKQ8N0W5 287 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 SLC35G2Q8TBE7 412 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 PIGKQ92643 395 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 RNF14Q9UBS8 474 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 APEX2Q9UBZ4 518 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 FRMD4BQ9Y2L6 1034 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 GOLGA8IPA6NC78 632 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 GOLGA6CA6NDK9 693 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 GOLGA8JA6NMD2 632 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 KPNA7A9QM74 516 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 ANKRD65E5RJM6 399 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 K7EQS6 105 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 TNFRSF10BO14763 440 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 ALDH1A2O94788 518 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 NFATC1O95644 943 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 GOLGA6DP0CG33 693 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 FERP16591 822 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 OPRD1P41143 372 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 MRPS21P82921 87 aaKnown RBP8.63□□□□□ -1.03
NEDD8-207ENST00000533242 RING1Q06587 406 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 SKIDA1Q1XH10 827 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 GLE1Q53GS7 698 aaKnown RBP8.63□□□□□ -1.03
NEDD8-207ENST00000533242 C10orf76Q5T2E6 689 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 NAA35Q5VZE5 725 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 ANO7Q6IWH7 933 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 LPCAT2Q7L5N7 544 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 PEX26Q7Z412 305 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 NT5DC4Q86YG4 428 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 KIAA1958Q8N8K9 716 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 HES6Q96HZ4 224 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 NUSAP1Q9BXS6 441 aaKnown RBP8.63□□□□□ -1.03
NEDD8-207ENST00000533242 LRRC4CQ9HCJ2 640 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 TRPC7Q9HCX4 862 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 GOLGA6AQ9NYA3 693 aa8.63□□□□□ -1.03
NEDD8-207ENST00000533242 UBE4BO95155 1302 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 DDX3YO15523 660 aaKnown RBP8.62□□□□□ -1.03
NEDD8-207ENST00000533242 SART1O43290 800 aaKnown RBP8.62□□□□□ -1.03
NEDD8-207ENST00000533242 HYAL3O43820 417 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-207ENST00000533242 CKMP06732 381 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 PFKLP17858 780 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 ADSSP30520 456 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 PNPLA4P41247 253 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 VASPP50552 380 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-207ENST00000533242 PDE6CP51160 858 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 SEC13P55735 322 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 PPARDQ03181 441 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 BYSLQ13895 437 aaKnown RBP8.62□□□□□ -1.03
NEDD8-207ENST00000533242 HSF5Q4G112 596 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-207ENST00000533242 TRIM61Q5EBN2 209 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 SDHAF4Q5VUM1 108 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 LMBRD2Q68DH5 695 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-207ENST00000533242 SLFN12LQ6IEE8 588 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 KIAA1211LQ6NV74 962 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 ADAT2Q7Z6V5 191 aaKnown RBP8.62□□□□□ -1.03
NEDD8-207ENST00000533242 PIP4P1Q86T03 277 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 SYT12Q8IV01 421 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 SLC9A9Q8IVB4 645 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 IFT20Q8IY31 132 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 STKLD1Q8NE28 680 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 MDGA1Q8NFP4 955 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 SPATA18Q8TC71 538 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 ACTRT1Q8TDG2 376 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 SH3RF2Q8TEC5 729 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 ALG3Q92685 438 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 SPACA7Q96KW9 195 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 SLC22A12Q96S37 553 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 ACBD6Q9BR61 282 aa8.62□□□□□ -1.03
NEDD8-207ENST00000533242 AMACRQ9UHK6 382 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms