RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 NELFBQ8WX92 580 aa18.6■□□□□ 0.57
PCF11-206ENST00000533018 KCTD13Q8WZ19 329 aa18.6■□□□□ 0.57
PCF11-206ENST00000533018 GOLGA1Q92805 767 aa18.6■□□□□ 0.57
PCF11-206ENST00000533018 FOXJ1Q92949 421 aa18.6■□□□□ 0.57
PCF11-206ENST00000533018 SLC2A11Q9BYW1 496 aa18.6■□□□□ 0.57
PCF11-206ENST00000533018 CNGB3Q9NQW8 809 aa18.6■□□□□ 0.57
PCF11-206ENST00000533018 HBS1LQ9Y450 684 aaKnown RBP18.6■□□□□ 0.57
PCF11-206ENST00000533018 USP24Q9UPU5 2620 aa18.6■□□□□ 0.57
PCF11-206ENST00000533018 PCNX2A6NKB5 2137 aa18.59■□□□□ 0.57
PCF11-206ENST00000533018 M0QYV0 167 aa18.59■□□□□ 0.57
PCF11-206ENST00000533018 MSI1O43347 362 aaKnown RBP18.59■□□□□ 0.57
PCF11-206ENST00000533018 OPHN1O60890 802 aa18.59■□□□□ 0.57
PCF11-206ENST00000533018 EPHX1P07099 455 aa18.59■□□□□ 0.57
PCF11-206ENST00000533018 ACADMP11310 421 aa18.59■□□□□ 0.57
PCF11-206ENST00000533018 CD6P30203 668 aa18.59■□□□□ 0.57
PCF11-206ENST00000533018 ZNF132P52740 706 aa18.59■□□□□ 0.57
PCF11-206ENST00000533018 EIF4HQ15056 248 aaKnown RBP18.59■□□□□ 0.57
PCF11-206ENST00000533018 PLEKHG6Q3KR16 790 aa18.59■□□□□ 0.57
PCF11-206ENST00000533018 SERPINA13PQ6UXR4 307 aa18.59■□□□□ 0.57
PCF11-206ENST00000533018 CACUL1Q86Y37 369 aa18.59■□□□□ 0.57
PCF11-206ENST00000533018 TMPRSS6Q8IU80 811 aa18.59■□□□□ 0.57
PCF11-206ENST00000533018 UBR7Q8N806 425 aa18.59■□□□□ 0.57
PCF11-206ENST00000533018 TFAP2BQ92481 460 aa18.59■□□□□ 0.57
PCF11-206ENST00000533018 TMA16Q96EY4 203 aaKnown RBP18.59■□□□□ 0.57
PCF11-206ENST00000533018 SIPA1Q96FS4 1042 aa18.59■□□□□ 0.57
PCF11-206ENST00000533018 TOE1Q96GM8 510 aaKnown RBP18.59■□□□□ 0.57
PCF11-206ENST00000533018 ASPMQ8IZT6 3477 aa18.58■□□□□ 0.57
PCF11-206ENST00000533018 BICDL2A1A5D9 508 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 MEI4A8MW99 385 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 BIN1O00499 593 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 TIMM44O43615 452 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 CALCAP01258 141 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 SYPP08247 313 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 GNSP15586 552 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 BRD2P25440 801 aaKnown RBP18.58■□□□□ 0.56
PCF11-206ENST00000533018 MAOBP27338 520 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 DAOAP59103 153 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 WDR45BQ5MNZ6 344 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 ADGRF1Q5T601 910 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 PMF1Q6P1K2 205 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 RRAGAQ7L523 313 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 FAM217AQ8IXS0 508 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 MINDY1Q8N5J2 469 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 PRCCQ92733 491 aaPredicted RBP18.58■□□□□ 0.56
PCF11-206ENST00000533018 KAT5Q92993 513 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 ZNF419Q96HQ0 510 aaPredicted RBP18.58■□□□□ 0.56
PCF11-206ENST00000533018 MKRN2Q9H000 416 aaKnown RBP18.58■□□□□ 0.56
PCF11-206ENST00000533018 PLA2G4CQ9UP65 541 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 CTNND2Q9UQB3 1225 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 CACNA1EQ15878 2313 aa18.58■□□□□ 0.56
PCF11-206ENST00000533018 RNF225M0QZC1 329 aaPredicted RBP18.57■□□□□ 0.56
PCF11-206ENST00000533018 ARHGAP33O14559 1287 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 PRKCHP24723 683 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 HOXD9P28356 352 aaPredicted RBP18.57■□□□□ 0.56
PCF11-206ENST00000533018 STX17P56962 302 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 ZNF445P59923 1031 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 STILQ15468 1287 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 CNGA2Q16280 664 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 PKDCCQ504Y2 493 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 FNDC3BQ53EP0 1204 aaKnown RBP18.57■□□□□ 0.56
PCF11-206ENST00000533018 TMEM215Q68D42 235 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 ELOA2Q8IYF1 753 aaPredicted RBP18.57■□□□□ 0.56
PCF11-206ENST00000533018 RBBP8NLQ8NC74 664 aaPredicted RBP18.57■□□□□ 0.56
PCF11-206ENST00000533018 OR2I1PQ8NGU4 316 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 SLC35F5Q8WV83 523 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 GPR174Q9BXC1 333 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 MIS12Q9H081 205 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 MIR1-1HGQ9H1L0 117 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 CAPN10Q9HC96 672 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 ITM2CQ9NQX7 267 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 SUSD2Q9UGT4 822 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.57■□□□□ 0.56
PCF11-206ENST00000533018 CKAP5Q14008 2032 aa18.57■□□□□ 0.56
PCF11-206ENST00000533018 PPP1R3GB7ZBB8 358 aa18.56■□□□□ 0.56
PCF11-206ENST00000533018 PMM2O15305 246 aa18.56■□□□□ 0.56
PCF11-206ENST00000533018 P4HA2O15460 535 aa18.56■□□□□ 0.56
PCF11-206ENST00000533018 NCAM1P13591 858 aa18.56■□□□□ 0.56
PCF11-206ENST00000533018 SPINK2P20155 84 aa18.56■□□□□ 0.56
PCF11-206ENST00000533018 SLC11A2P49281 568 aa18.56■□□□□ 0.56
PCF11-206ENST00000533018 TPMTP51580 245 aa18.56■□□□□ 0.56
PCF11-206ENST00000533018 KCNH2Q12809 1159 aa18.56■□□□□ 0.56
PCF11-206ENST00000533018 ENPP2Q13822 863 aa18.56■□□□□ 0.56
PCF11-206ENST00000533018 TTI2Q6NXR4 508 aa18.56■□□□□ 0.56
PCF11-206ENST00000533018 METTL3Q86U44 580 aaKnown RBP18.56■□□□□ 0.56
PCF11-206ENST00000533018 CLEC4CQ8WTT0 213 aa18.56■□□□□ 0.56
PCF11-206ENST00000533018 CYB5D2Q8WUJ1 264 aa18.56■□□□□ 0.56
PCF11-206ENST00000533018 IRGQQ8WZA9 623 aa18.56■□□□□ 0.56
PCF11-206ENST00000533018 ABCB8Q9NUT2 735 aa18.56■□□□□ 0.56
PCF11-206ENST00000533018 WSB2Q9NYS7 404 aaPredicted RBP18.56■□□□□ 0.56
PCF11-206ENST00000533018 USP36Q9P275 1121 aaKnown RBP18.56■□□□□ 0.56
PCF11-206ENST00000533018 SPAARA0A1B0GVQ0 90 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 KCNJ18B7U540 433 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 TBL1XO60907 577 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 LATS1O95835 1130 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 LTFP02788 710 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 KRT5P13647 590 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 HLA-EP13747 358 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 BMP6P22004 513 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 HLA-FP30511 346 aa18.55■□□□□ 0.56
PCF11-206ENST00000533018 OXTRP30559 389 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms