RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 SERPINB11Q96P15 392 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 NOX5Q96PH1 765 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 CPXM1Q96SM3 734 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 SMOC1Q9H4F8 434 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 SYNCQ9H7C4 482 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 ANO10Q9NW15 660 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 FANCLQ9NW38 375 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 COX16Q9P0S2 106 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 STIM2Q9P246 746 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 FBXO10Q9UK96 956 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 STARD13Q9Y3M8 1113 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 CEP83Q9Y592 693 aa16.17■□□□□ 0.18
CAPN1-213ENST00000527897 ACSL4O60488 711 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 TBL1XO60907 577 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 LRP3O75074 770 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 GRAP2O75791 330 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 EPN2O95208 641 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 HOXD9P28356 352 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-213ENST00000527897 RPL34P49207 117 aaKnown RBP16.16■□□□□ 0.18
CAPN1-213ENST00000527897 SGSHP51688 502 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 CREB5Q02930 508 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 KRT31Q15323 416 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 SF3A2Q15428 464 aaKnown RBP16.16■□□□□ 0.18
CAPN1-213ENST00000527897 TAF5Q15542 800 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 TAF3Q5VWG9 929 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 OR6B2Q6IFH4 312 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 PRR23CQ6ZRP0 262 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 TMEM110Q86TL2 294 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 TAC4Q86UU9 113 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 WDTC1Q8N5D0 677 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 UCMAQ8WVF2 138 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 SORCS1Q8WY21 1168 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 PIWIL1Q96J94 861 aaKnown RBP16.16■□□□□ 0.18
CAPN1-213ENST00000527897 ZC3H10Q96K80 434 aaKnown RBP16.16■□□□□ 0.18
CAPN1-213ENST00000527897 TRIM62Q9BVG3 475 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 POPDC2Q9HBU9 364 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 CDV3Q9UKY7 258 aaKnown RBP16.16■□□□□ 0.18
CAPN1-213ENST00000527897 PCDHGC3Q9UN70 934 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 SLC27A6Q9Y2P4 619 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 LAMA1P25391 3075 aa16.16■□□□□ 0.18
CAPN1-213ENST00000527897 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-213ENST00000527897 LATS1O95835 1130 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 IGLV3-27P01718 113 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 UCHL3P15374 230 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 GABRG2P18507 467 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 MPLP40238 635 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 DHPSP49366 369 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-213ENST00000527897 KLK7P49862 253 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 BPIFB4P59827 614 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 ZNF445P59923 1031 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 YWHAZP63104 245 aaKnown RBP16.15■□□□□ 0.18
CAPN1-213ENST00000527897 CSRP2Q16527 193 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 AASDHQ4L235 1098 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-213ENST00000527897 DCAF6Q58WW2 860 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 FKBP15Q5T1M5 1219 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 CDKAL1Q5VV42 579 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 KIAA1211LQ6NV74 962 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 ARMCX6Q7L4S7 300 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 FAM71AQ8IYT1 594 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 FRMD1Q8N878 549 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 C12orf50Q8NA57 414 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-213ENST00000527897 IPO4Q8TEX9 1081 aaKnown RBP16.15■□□□□ 0.18
CAPN1-213ENST00000527897 LOXL4Q96JB6 756 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 FCRL2Q96LA5 508 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-213ENST00000527897 PCMTD1Q96MG8 357 aaPredicted RBP16.15■□□□□ 0.18
CAPN1-213ENST00000527897 SLC2A11Q9BYW1 496 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 FAM204AQ9H8W3 233 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 ABCB8Q9NUT2 735 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 CALCOCO1Q9P1Z2 691 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 TLR6Q9Y2C9 796 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 STON1Q9Y6Q2 735 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 CEP250Q9BV73 2442 aa16.15■□□□□ 0.18
CAPN1-213ENST00000527897 A0A1W2PQF6 199 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 TYW5A2RUC4 315 aaKnown RBP16.14■□□□□ 0.17
CAPN1-213ENST00000527897 PRR5-ARHGAP8B1AHC4 643 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 APOEP02649 317 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 CDK11BP21127 795 aaKnown RBP16.14■□□□□ 0.17
CAPN1-213ENST00000527897 SLC6A4P31645 630 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 P2RY2P41231 377 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 PITX1P78337 314 aaPredicted RBP16.14■□□□□ 0.17
CAPN1-213ENST00000527897 ARHGAP8P85298 464 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 MYL5Q02045 173 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 RING1Q06587 406 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 FAM133BQ5BKY9 247 aaKnown RBP16.14■□□□□ 0.17
CAPN1-213ENST00000527897 ZC3H12AQ5D1E8 599 aaKnown RBP16.14■□□□□ 0.17
CAPN1-213ENST00000527897 PIK3R6Q5UE93 754 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 DPY19L2P1Q6NXN4 242 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 KIAA1324Q6UXG2 1013 aaKnown RBP16.14■□□□□ 0.17
CAPN1-213ENST00000527897 FAM183BPQ6ZVS7 135 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 C11orf74Q86VG3 221 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 ANKRD20A12PQ8NF67 263 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 RNF34Q969K3 372 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 GABRG3Q99928 467 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 DDX50Q9BQ39 737 aaKnown RBP16.14■□□□□ 0.17
CAPN1-213ENST00000527897 SLC6A17Q9H1V8 727 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 LHX5Q9H2C1 402 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 FAM207AQ9NSI2 230 aaPredicted RBP16.14■□□□□ 0.17
CAPN1-213ENST00000527897 ELOVL2Q9NXB9 296 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 STOML2Q9UJZ1 356 aa16.14■□□□□ 0.17
CAPN1-213ENST00000527897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms