RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 RTP5Q14D33 572 aa12.9□□□□□ -0.34
SRPRA-202ENST00000527817 SCARA5Q6ZMJ2 495 aa12.9□□□□□ -0.34
SRPRA-202ENST00000527817 ZNF843Q8N446 348 aa12.9□□□□□ -0.34
SRPRA-202ENST00000527817 SORCS1Q8WY21 1168 aa12.9□□□□□ -0.34
SRPRA-202ENST00000527817 CYFIP2Q96F07 1278 aa12.9□□□□□ -0.34
SRPRA-202ENST00000527817 ORAI3Q9BRQ5 295 aa12.9□□□□□ -0.34
SRPRA-202ENST00000527817 CIPCQ9C0C6 399 aa12.9□□□□□ -0.34
SRPRA-202ENST00000527817 NRSN2Q9GZP1 204 aa12.9□□□□□ -0.34
SRPRA-202ENST00000527817 TMEM245Q9H330 911 aa12.9□□□□□ -0.34
SRPRA-202ENST00000527817 CUEDC2Q9H467 287 aa12.9□□□□□ -0.34
SRPRA-202ENST00000527817 FBRSQ9HAH7 460 aa12.9□□□□□ -0.34
SRPRA-202ENST00000527817 SGK2Q9HBY8 427 aa12.9□□□□□ -0.34
SRPRA-202ENST00000527817 FAM49BQ9NUQ9 324 aa12.9□□□□□ -0.34
SRPRA-202ENST00000527817 AGO1Q9UL18 857 aaKnown RBP12.9□□□□□ -0.34
SRPRA-202ENST00000527817 TMEM131Q92545 1883 aa12.9□□□□□ -0.34
SRPRA-202ENST00000527817 A0A1B0GTQ1 180 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 VPS37CA5D8V6 355 aaPredicted RBP12.89□□□□□ -0.35
SRPRA-202ENST00000527817 CAPN8A6NHC0 703 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 LRRIQ3A6PVS8 624 aaPredicted RBP12.89□□□□□ -0.35
SRPRA-202ENST00000527817 ENC1O14682 589 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 EXOC3O60645 756 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 CORO1AP31146 461 aaKnown RBP12.89□□□□□ -0.35
SRPRA-202ENST00000527817 BCAT1P54687 386 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 RACK1P63244 317 aaKnown RBP12.89□□□□□ -0.35
SRPRA-202ENST00000527817 ASIC1P78348 528 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 SEMG2Q02383 582 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 EHHADHQ08426 723 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 E2F4Q16254 413 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 DENND1CQ8IV53 801 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 NELFCDQ8IXH7 590 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 FAM217AQ8IXS0 508 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 ELMO3Q96BJ8 720 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 C7orf25Q9BPX7 421 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 TFIP11Q9UBB9 837 aaKnown RBP12.89□□□□□ -0.35
SRPRA-202ENST00000527817 HMGXB4Q9UGU5 601 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 PLA2G4CQ9UP65 541 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 AK5Q9Y6K8 562 aa12.89□□□□□ -0.35
SRPRA-202ENST00000527817 ATMQ13315 3056 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 TEX51A0A1B0GUA7 166 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 VILLO15195 856 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 FSBPO95073 299 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 LDOC1O95751 146 aaPredicted RBP12.88□□□□□ -0.35
SRPRA-202ENST00000527817 HMBSP08397 361 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 PDCP20941 246 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 RPS14P62263 151 aaKnown RBP12.88□□□□□ -0.35
SRPRA-202ENST00000527817 EFEMP1Q12805 493 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 TARDBPQ13148 414 aaKnown RBP eCLIP12.88□□□□□ -0.35
SRPRA-202ENST00000527817 KNOP1Q1ED39 458 aaKnown RBP12.88□□□□□ -0.35
SRPRA-202ENST00000527817 MPPE1Q53F39 396 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 FAM173BQ6P4H8 233 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 GPR155Q7Z3F1 870 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 ADAT2Q7Z6V5 191 aaKnown RBP12.88□□□□□ -0.35
SRPRA-202ENST00000527817 CACUL1Q86Y37 369 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 CACTIN-AS1Q8N1I8 211 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 SNIP1Q8TAD8 396 aaKnown RBP12.88□□□□□ -0.35
SRPRA-202ENST00000527817 DDI1Q8WTU0 396 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 TMEM174Q8WUU8 243 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 JAKMIP2Q96AA8 810 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 SKA1Q96BD8 255 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 FCRL3Q96P31 734 aaPredicted RBP12.88□□□□□ -0.35
SRPRA-202ENST00000527817 DUSP16Q9BY84 665 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 PRSS16Q9NQE7 514 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 DMAC2Q9NW81 257 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 SUN2Q9UH99 717 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 COL6A6A6NMZ7 2263 aa12.88□□□□□ -0.35
SRPRA-202ENST00000527817 ARID1BQ8NFD5 2236 aaPredicted RBP12.88□□□□□ -0.35
SRPRA-202ENST00000527817 COL5A1P20908 1838 aaPredicted RBP12.88□□□□□ -0.35
SRPRA-202ENST00000527817 RFPL3O75679 317 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 CLSTN1O94985 981 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 ASS1P00966 412 aaKnown RBP12.87□□□□□ -0.35
SRPRA-202ENST00000527817 DNTTP04053 509 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 NEFLP07196 543 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 ASPAP45381 313 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 C21orf59P57076 290 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 IL9RQ01113 521 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 INCA1Q0VD86 236 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 ZACNQ401N2 412 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 FNDC3BQ53EP0 1204 aaKnown RBP12.87□□□□□ -0.35
SRPRA-202ENST00000527817 LAYNQ6UX15 382 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 UNC13DQ70J99 1090 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 KIAA0907Q7Z7F0 614 aaPredicted RBP12.87□□□□□ -0.35
SRPRA-202ENST00000527817 ARHGAP18Q8N392 663 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 GOLGA5Q8TBA6 731 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 WFIKKN2Q8TEU8 576 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 BAP1Q92560 729 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 TSC1Q92574 1164 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 GOLGA1Q92805 767 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 FGF11Q92914 225 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 CNDP2Q96KP4 475 aaKnown RBP12.87□□□□□ -0.35
SRPRA-202ENST00000527817 TWNKQ96RR1 684 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 USP28Q96RU2 1077 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 ELF4Q99607 663 aaPredicted RBP12.87□□□□□ -0.35
SRPRA-202ENST00000527817 NT5C1AQ9BXI3 368 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 ACE2Q9BYF1 805 aaPredicted RBP12.87□□□□□ -0.35
SRPRA-202ENST00000527817 UBXN6Q9BZV1 441 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 CYP3A43Q9HB55 503 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 MARCH2Q9P0N8 246 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 RASAL2Q9UJF2 1139 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 STRIP2Q9ULQ0 834 aa12.87□□□□□ -0.35
SRPRA-202ENST00000527817 A0A1W2PPC4 97 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms