RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CRLS1Q9UJA2 301 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 BAG5Q9UL15 447 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 GABRQQ9UN88 632 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 TLL1O43897 1013 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 LRGUKQ96M69 825 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 ZBTB18Q99592 522 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 PRMT1Q99873 361 aaKnown RBP15.51■□□□□ 0.07
USP47-207ENST00000527733 ZNF670Q9BS34 389 aa15.51■□□□□ 0.07
USP47-207ENST00000527733 BAG2O95816 211 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 HDCP19113 662 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 ZNF618Q5T7W0 954 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 SDHAF4Q5VUM1 108 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 FAM228AQ86W67 206 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 ADGRE3Q9BY15 652 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 SEMA4AQ9H3S1 761 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 CPSF2Q9P2I0 782 aaKnown RBP15.5■□□□□ 0.07
USP47-207ENST00000527733 GLUD2P49448 558 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 CDH17Q12864 832 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 STX3Q13277 289 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 TMEM192Q8IY95 271 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 ACBD6Q9BR61 282 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 B3GNT5Q9BYG0 378 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 MSRAQ9UJ68 235 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 MYH7P12883 1935 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 CAND2O75155 1236 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 PECAM1P16284 738 aaPredicted RBP15.5■□□□□ 0.07
USP47-207ENST00000527733 HDAC4P56524 1084 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 TAS2R40P59535 323 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 LRRN4CLQ8ND94 238 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 XPO6Q96QU8 1125 aaKnown RBP15.5■□□□□ 0.07
USP47-207ENST00000527733 SUDS3Q9H7L9 328 aaPredicted RBP15.5■□□□□ 0.07
USP47-207ENST00000527733 PLA2G4CQ9UP65 541 aa15.5■□□□□ 0.07
USP47-207ENST00000527733 VNN1O95497 513 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 ATP4AP20648 1035 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 TLE2Q04725 743 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 IMPG1Q17R60 797 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 SLC45A4Q5BKX6 768 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 INTS6LQ5JSJ4 861 aaKnown RBP15.49■□□□□ 0.07
USP47-207ENST00000527733 STRADAQ7RTN6 431 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 ZNF516Q92618 1163 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 C16orf70Q9BSU1 422 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 NRDE2Q9H7Z3 1164 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 TMEM161AQ9NX61 479 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.49■□□□□ 0.07
USP47-207ENST00000527733 SAE1Q9UBE0 346 aaPredicted RBP15.49■□□□□ 0.07
USP47-207ENST00000527733 TAF1P21675 1872 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 MAGEB16A2A368 324 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 NVLO15381 856 aaKnown RBP15.49■□□□□ 0.07
USP47-207ENST00000527733 TIMM44O43615 452 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 CRTAMO95727 393 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 CHRM3P20309 590 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 WEE1P30291 646 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 LLGL2Q6P1M3 1020 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 SLC39A4Q6P5W5 647 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 ALG3Q92685 438 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 EML4Q9HC35 981 aaKnown RBP15.49■□□□□ 0.07
USP47-207ENST00000527733 ASAH2Q9NR71 780 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 EPS15L1Q9UBC2 864 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 ZFP69BQ9UJL9 534 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 NOCTQ9UK39 431 aaKnown RBP15.49■□□□□ 0.07
USP47-207ENST00000527733 CDY1Q9Y6F8 540 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 HAUS5O94927 633 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 ZWINTO95229 277 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 FGBP02675 491 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 DUSP4Q13115 394 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 SLC25A52Q3SY17 297 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 SYTL3Q4VX76 610 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 AARS2Q5JTZ9 985 aaKnown RBP15.49■□□□□ 0.07
USP47-207ENST00000527733 MON1BQ7L1V2 547 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 KIRREL3Q8IZU9 778 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 PRELID2Q8N945 189 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 EPS8L3Q8TE67 593 aaKnown RBP15.49■□□□□ 0.07
USP47-207ENST00000527733 FNIP1Q8TF40 1166 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 ZNF197O14709 1029 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 FSCN2O14926 492 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 HSPA8P11142 646 aaKnown RBP15.49■□□□□ 0.07
USP47-207ENST00000527733 AMPD2Q01433 879 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 SH2D4BQ5SQS7 431 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 THEMIS2Q5TEJ8 643 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 XYLT1Q86Y38 959 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 ATAD1Q8NBU5 361 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 SH3KBP1Q96B97 665 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 FOPNLQ96NB1 174 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 HNRNPABQ99729 332 aaKnown RBP15.49■□□□□ 0.07
USP47-207ENST00000527733 UBE2OQ9C0C9 1292 aaKnown RBP15.49■□□□□ 0.07
USP47-207ENST00000527733 WWP1Q9H0M0 922 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 FGFR1OP2Q9NVK5 253 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 THG1LQ9NWX6 298 aaKnown RBP15.49■□□□□ 0.07
USP47-207ENST00000527733 SLC24A2Q9UI40 661 aa15.49■□□□□ 0.07
USP47-207ENST00000527733 RRP15Q9Y3B9 282 aaKnown RBP15.49■□□□□ 0.07
USP47-207ENST00000527733 SYN3O14994 580 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 HOXD13P35453 343 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 DAB2IPQ5VWQ8 1189 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 OTOP2Q7RTS6 562 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 SLC26A11Q86WA9 606 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 ECHDC2Q86YB7 292 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.48■□□□□ 0.07
USP47-207ENST00000527733 TFAP2BQ92481 460 aa15.48■□□□□ 0.07
USP47-207ENST00000527733 TSEN34Q9BSV6 310 aaKnown RBP15.48■□□□□ 0.07
USP47-207ENST00000527733 NUF2Q9BZD4 464 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms