RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 COPB1P53618 953 aaKnown RBP17.69■□□□□ 0.42
CCS-203ENST00000526058 BPIFB4P59827 614 aa17.69■□□□□ 0.42
CCS-203ENST00000526058 PITX1P78337 314 aaPredicted RBP17.69■□□□□ 0.42
CCS-203ENST00000526058 FAM133BQ5BKY9 247 aaKnown RBP17.69■□□□□ 0.42
CCS-203ENST00000526058 NUGGCQ68CJ6 796 aa17.69■□□□□ 0.42
CCS-203ENST00000526058 NADSYN1Q6IA69 706 aa17.69■□□□□ 0.42
CCS-203ENST00000526058 RFWD3Q6PCD5 774 aa17.69■□□□□ 0.42
CCS-203ENST00000526058 BEND5Q7L4P6 421 aa17.69■□□□□ 0.42
CCS-203ENST00000526058 TRMT11Q7Z4G4 463 aaKnown RBP17.69■□□□□ 0.42
CCS-203ENST00000526058 CHPFQ8IZ52 775 aa17.69■□□□□ 0.42
CCS-203ENST00000526058 HMGB4Q8WW32 186 aa17.69■□□□□ 0.42
CCS-203ENST00000526058 TMA16Q96EY4 203 aaKnown RBP17.69■□□□□ 0.42
CCS-203ENST00000526058 SLC39A13Q96H72 371 aa17.69■□□□□ 0.42
CCS-203ENST00000526058 STK33Q9BYT3 514 aa17.69■□□□□ 0.42
CCS-203ENST00000526058 HSD3B7Q9H2F3 369 aa17.69■□□□□ 0.42
CCS-203ENST00000526058 CACNA2D2Q9NY47 1150 aa17.69■□□□□ 0.42
CCS-203ENST00000526058 LIMA1Q9UHB6 759 aaKnown RBP17.69■□□□□ 0.42
CCS-203ENST00000526058 TLR6Q9Y2C9 796 aa17.69■□□□□ 0.42
CCS-203ENST00000526058 THADAQ6YHU6 1953 aa17.69■□□□□ 0.42
CCS-203ENST00000526058 A0A1W2PQF6 199 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 WASH3PC4AMC7 463 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 F8VZ95 297 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 EPHB6O15197 1021 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 GRAP2O75791 330 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 ERBB2P04626 1255 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 TPM2P07951 284 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 HOXB2P14652 356 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 LAMA1P25391 3075 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 SLC11A2P49281 568 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 PLK5Q496M5 336 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 PTPN20Q4JDL3 420 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 USP39Q53GS9 565 aaKnown RBP17.68■□□□□ 0.42
CCS-203ENST00000526058 TAF3Q5VWG9 929 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 OR6B2Q6IFH4 312 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 FAM183BPQ6ZVS7 135 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 DEFB106AQ8N104 65 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 DDX1Q92499 740 aaKnown RBP17.68■□□□□ 0.42
CCS-203ENST00000526058 AZIN2Q96A70 460 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 ZC3H10Q96K80 434 aaKnown RBP17.68■□□□□ 0.42
CCS-203ENST00000526058 NOX5Q96PH1 765 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 SLC2A11Q9BYW1 496 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 DUSP15Q9H1R2 295 aaPredicted RBP17.68■□□□□ 0.42
CCS-203ENST00000526058 FAM207AQ9NSI2 230 aaPredicted RBP17.68■□□□□ 0.42
CCS-203ENST00000526058 BCCIPQ9P287 314 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCS-203ENST00000526058 USP18Q9UMW8 372 aa17.68■□□□□ 0.42
CCS-203ENST00000526058 TRUB2O95900 331 aaKnown RBP17.67■□□□□ 0.42
CCS-203ENST00000526058 ZNF18P17022 549 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 CDK11BP21127 795 aaKnown RBP17.67■□□□□ 0.42
CCS-203ENST00000526058 ZNF445P59923 1031 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 POLR2FP61218 127 aaKnown RBP17.67■□□□□ 0.42
CCS-203ENST00000526058 NNTQ13423 1086 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 ANO6Q4KMQ2 910 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 DCAF6Q58WW2 860 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 ZC3H12AQ5D1E8 599 aaKnown RBP17.67■□□□□ 0.42
CCS-203ENST00000526058 FKBP15Q5T1M5 1219 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 PIK3R6Q5UE93 754 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 TMEM215Q68D42 235 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 SDE2Q6IQ49 451 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 KIAA1211LQ6NV74 962 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 CAVIN1Q6NZI2 390 aaKnown RBP17.67■□□□□ 0.42
CCS-203ENST00000526058 OLFML1Q6UWY5 402 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 ANKS1BQ7Z6G8 1248 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 NOP9Q86U38 636 aaKnown RBP17.67■□□□□ 0.42
CCS-203ENST00000526058 AOPEPQ8N6M6 819 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 FRMD1Q8N878 549 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 OLIG1Q8TAK6 271 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 RLN3Q8WXF3 142 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 MYEOVQ96EZ4 313 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 GABRG3Q99928 467 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 TRIM62Q9BVG3 475 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 ARRDC1-AS1Q9H2J1 176 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 PDCL3Q9H2J4 239 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 CD248Q9HCU0 757 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 SIK3Q9Y2K2 1263 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 RAD54BQ9Y620 910 aa17.67■□□□□ 0.42
CCS-203ENST00000526058 IRAK2O43187 625 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 TBL1XO60907 577 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 MOCS2O96007 188 aaPredicted RBP17.66■□□□□ 0.42
CCS-203ENST00000526058 IGLV3-25P01717 112 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 GABRG2P18507 467 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 BCKDHBP21953 392 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 HLA-FP30511 346 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 GBP1P32455 592 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 EIF4EBP2Q13542 120 aaPredicted RBP17.66■□□□□ 0.42
CCS-203ENST00000526058 SYCP1Q15431 976 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 CCDC6Q16204 474 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 EFHC1Q5JVL4 640 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 APTXQ7Z2E3 356 aaKnown RBP17.66■□□□□ 0.42
CCS-203ENST00000526058 PGBD3Q8N328 593 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 GPR161Q8N6U8 529 aaKnown RBP17.66■□□□□ 0.42
CCS-203ENST00000526058 ANKRD20A12PQ8NF67 263 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 WFDC5Q8TCV5 224 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 SORCS1Q8WY21 1168 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 SLC2A13Q96QE2 648 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 NUCKS1Q9H1E3 243 aaKnown RBP17.66■□□□□ 0.42
CCS-203ENST00000526058 SYNCQ9H7C4 482 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 NLRC4Q9NPP4 1024 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 SEMA4GQ9NTN9 838 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 ASNSD1Q9NWL6 643 aa17.66■□□□□ 0.42
CCS-203ENST00000526058 ELOVL2Q9NXB9 296 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms