RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 HOXD9P28356 352 aaPredicted RBP19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 CLCN1P35523 988 aa19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 YWHAZP63104 245 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 SPEM2Q0P670 501 aa19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 DRAP1Q14919 205 aaPredicted RBP19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 ANKRD20A12PQ8NF67 263 aa19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 PPP1R13BQ96KQ4 1090 aa19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 SPACA7Q96KW9 195 aa19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 NAA15Q9BXJ9 866 aaKnown RBP19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 DUSP15Q9H1R2 295 aaPredicted RBP19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 PARD6AQ9NPB6 346 aa19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 SEMA4GQ9NTN9 838 aa19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 BCCIPQ9P287 314 aaKnown RBP eCLIP19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 AJAP1Q9UKB5 411 aaPredicted RBP19.19■□□□□ 0.66
TSPAN4-216ENST00000526055 ACSL4O60488 711 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 P2RY2P41231 377 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 MYL5Q02045 173 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 RAPGEF1Q13905 1077 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 KRT31Q15323 416 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 EFHC1Q5JVL4 640 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 RNF43Q68DV7 783 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 SLC47A2Q86VL8 602 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 ZDHHC17Q8IUH5 632 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 WDTC1Q8N5D0 677 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 WFIKKN2Q8TEU8 576 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 SLC39A13Q96H72 371 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 FCRL2Q96LA5 508 aaPredicted RBP19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 CPXM1Q96SM3 734 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 STK33Q9BYT3 514 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 TPSD1Q9BZJ3 242 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 TAB2Q9NYJ8 693 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 THAP10Q9P2Z0 257 aaPredicted RBP19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 NAALADL1Q9UQQ1 740 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 FHOD1Q9Y613 1164 aa19.18■□□□□ 0.66
TSPAN4-216ENST00000526055 EML5Q05BV3 1969 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 RALGAPA1Q6GYQ0 2036 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 A0A1W2PQF6 199 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 HSF2BPO75031 334 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 FOXK2Q01167 660 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 MTA1Q13330 715 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 ENPP2Q13822 863 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 PUM1Q14671 1186 aaKnown RBP eCLIP19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 GEN1Q17RS7 908 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 SPDYCQ5MJ68 293 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 FKBP15Q5T1M5 1219 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 PIK3R6Q5UE93 754 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 PMS2CLQ68D20 193 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 C11orf57Q6ZUT1 292 aaPredicted RBP19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 IPO4Q8TEX9 1081 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 HMGB4Q8WW32 186 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 LSM14BQ9BX40 385 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 CD248Q9HCU0 757 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 ZDHHC4Q9NPG8 344 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 FANCLQ9NW38 375 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 ELOVL2Q9NXB9 296 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 DLL3Q9NYJ7 618 aa19.17■□□□□ 0.66
TSPAN4-216ENST00000526055 SDK1Q7Z5N4 2213 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 TYW5A2RUC4 315 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 ZNF217O75362 1048 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 IGLV3-25P01717 112 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 APOEP02649 317 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 ZNF806P0C7X5 589 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 SLC2A3P11169 496 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 GBP1P32455 592 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 CDH5P33151 784 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 FAM133BQ5BKY9 247 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 PLA2G2CQ5R387 149 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 SYPL2Q5VXT5 272 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 PRR23CQ6ZRP0 262 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 ERMP1Q7Z2K6 904 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 TAC4Q86UU9 113 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 TMEM35BQ8NCS4 154 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 C1orf131Q8NDD1 294 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 RMDN1Q96DB5 314 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 SLC2A13Q96QE2 648 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 ACOX2Q99424 681 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 TMEM51Q9NW97 253 aa19.16■□□□□ 0.66
TSPAN4-216ENST00000526055 LRRC10BA6NIK2 292 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 F8VZ95 297 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 DCLK1O15075 740 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 TSPAN3O60637 253 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 LSM8O95777 96 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 TRUB2O95900 331 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 CYP11B1P15538 503 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 GABRG2P18507 467 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 SCNN1AP37088 669 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 CDK17Q00537 523 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 EIF4EBP2Q13542 120 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 STARD3Q14849 445 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 SLC26A9Q7LBE3 791 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 KIAA0907Q7Z7F0 614 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 PASD1Q8IV76 773 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 PGBD3Q8N328 593 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 HJURPQ8NCD3 748 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 ZNF397Q8NF99 534 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 NETO1Q8TDF5 533 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 BTN2A3PQ96KV6 586 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 VPS16Q9H269 839 aa19.15■□□□□ 0.66
TSPAN4-216ENST00000526055 ARRDC1-AS1Q9H2J1 176 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms