RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 SMYD3Q9H7B4 428 aa6.31□□□□□ -1.4
SPIDR-216ENST00000521918 LRRC4CQ9HCJ2 640 aa6.31□□□□□ -1.4
SPIDR-216ENST00000521918 TMEM30AQ9NV96 361 aa6.31□□□□□ -1.4
SPIDR-216ENST00000521918 DDX43Q9NXZ2 648 aaKnown RBP6.31□□□□□ -1.4
SPIDR-216ENST00000521918 WNT16Q9UBV4 365 aa6.31□□□□□ -1.4
SPIDR-216ENST00000521918 ZC3H7BQ9UGR2 993 aaKnown RBP6.31□□□□□ -1.4
SPIDR-216ENST00000521918 STRIP2Q9ULQ0 834 aa6.31□□□□□ -1.4
SPIDR-216ENST00000521918 TPX2Q9ULW0 747 aaKnown RBP6.31□□□□□ -1.4
SPIDR-216ENST00000521918 PCDHA5Q9Y5H7 936 aa6.31□□□□□ -1.4
SPIDR-216ENST00000521918 IKBKBO14920 756 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 PI15O43692 258 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 CALUO43852 315 aaPredicted RBP6.3□□□□□ -1.4
SPIDR-216ENST00000521918 ATP2C2O75185 946 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 NOL4O94818 638 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 KIF20AO95235 890 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 PRAMEF12O95522 483 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 ASS1P00966 412 aaKnown RBP6.3□□□□□ -1.4
SPIDR-216ENST00000521918 FAM163BP0C2L3 166 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 TRIM49P0CI25 452 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 TRIM49CP0CI26 452 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 MYL4P12829 197 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 CYP2F1P24903 491 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 GABRR2P28476 465 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 AVPR2P30518 371 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 DNAJA1P31689 397 aaKnown RBP6.3□□□□□ -1.4
SPIDR-216ENST00000521918 ATICP31939 592 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 PRCPP42785 496 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 MAGEA11P43364 429 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 ALDH1A3P47895 512 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 CLCN5P51795 746 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 CACNA2D1P54289 1103 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 GPC5P78333 572 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 CYP4F8P98187 520 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 PPP3CAQ08209 521 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 FCHO2Q0JRZ9 810 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 ZNF699Q32M78 642 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 WDR72Q3MJ13 1102 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 MGAT5BQ3V5L5 792 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 ARTNQ5T4W7 220 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 CYP4A22Q5TCH4 519 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 ZNF658Q5TYW1 1059 aaPredicted RBP6.3□□□□□ -1.4
SPIDR-216ENST00000521918 VITQ6UXI7 678 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 INTS8Q75QN2 995 aaKnown RBP6.3□□□□□ -1.4
SPIDR-216ENST00000521918 DNAJB7Q7Z6W7 309 aaPredicted RBP6.3□□□□□ -1.4
SPIDR-216ENST00000521918 ITIH5Q86UX2 942 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 SUGP1Q8IWZ8 645 aaKnown RBP6.3□□□□□ -1.4
SPIDR-216ENST00000521918 ADSSL1Q8N142 457 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 Q8N3U1 123 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 FAM169BQ8N8A8 192 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 ZSCAN18Q8TBC5 510 aaPredicted RBP6.3□□□□□ -1.4
SPIDR-216ENST00000521918 MYCBPAPQ8TBZ2 947 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 SMARCD2Q92925 531 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 MYLPFQ96A32 169 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 SYAP1Q96A49 352 aaPredicted RBP6.3□□□□□ -1.4
SPIDR-216ENST00000521918 TRMT2BQ96GJ1 504 aaKnown RBP6.3□□□□□ -1.4
SPIDR-216ENST00000521918 LRRC3BQ96PB8 259 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 PI4K2AQ9BTU6 479 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 SDCBP2Q9H190 292 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 DPEP3Q9H4B8 488 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 TBC1D17Q9HA65 648 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 ARHGEF3Q9NR81 526 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 DLGAP2Q9P1A6 1054 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 HMGXB4Q9UGU5 601 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 GTF3C4Q9UKN8 822 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 CDH9Q9ULB4 789 aa6.3□□□□□ -1.4
SPIDR-216ENST00000521918 PATJQ8NI35 1801 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 DNAH14Q0VDD8 3507 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 ANAPC1Q9H1A4 1944 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 CACNA1IQ9P0X4 2223 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 TRIM49BA6NDI0 452 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 GOLGA6L4A6NEF3 574 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 SLC16A3O15427 465 aaKnown RBP6.29□□□□□ -1.4
SPIDR-216ENST00000521918 LRRN2O75325 713 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 FGF19O95750 216 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 HLA-DRAP01903 254 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 CSH1P0DML2 217 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 CSH2P0DML3 217 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 GLULP15104 373 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 CDC25CP30307 473 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 SSTR4P31391 388 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 PSMC2P35998 433 aaKnown RBP6.29□□□□□ -1.4
SPIDR-216ENST00000521918 CCNFP41002 786 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 ETV3P41162 512 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 VIPR2P41587 438 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 RAP1GAPP47736 663 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 VAMP7P51809 220 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 STARD6P59095 220 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 TNNC1P63316 161 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 NHLH1Q02575 133 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 INCA1Q0VD86 236 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 ADAM9Q13443 819 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 BIRC3Q13489 604 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 MORC3Q14149 939 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 VEPH1Q14D04 833 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 MLF2Q15773 248 aaPredicted RBP6.29□□□□□ -1.4
SPIDR-216ENST00000521918 DDR2Q16832 855 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 OTOGLQ3ZCN5 2332 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 MDH1BQ5I0G3 518 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 SFRP5Q5T4F7 317 aa6.29□□□□□ -1.4
SPIDR-216ENST00000521918 SDHAF4Q5VUM1 108 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms