RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 GAD2Q05329 585 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 UBAP2LQ14157 1087 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 AASDHQ4L235 1098 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 ZCWPW2Q504Y3 356 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 USP39Q53GS9 565 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 PPM1JQ5JR12 505 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 STPG1Q5TH74 334 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 ANO7Q6IWH7 933 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 KRBA2Q6ZNG9 492 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 HTR3DQ70Z44 454 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 INTS8Q75QN2 995 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 GPRIN1Q7Z2K8 1008 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 C11orf74Q86VG3 221 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 TMEM25Q86YD3 366 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 GUF1Q8N442 669 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 ALLCQ8N6M5 410 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 C12orf50Q8NA57 414 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 IL17RCQ8NAC3 791 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 TXNDC5Q8NBS9 432 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 OLIG1Q8TAK6 271 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 TAS1R2Q8TE23 839 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 WHAMMQ8TF30 809 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 DDX1Q92499 740 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 CCDC47Q96A33 483 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 GOLPH3LQ9H4A5 285 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 SMOC1Q9H4F8 434 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 FBXO44Q9H4M3 255 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 ARHGEF4Q9NR80 690 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 FAM49BQ9NUQ9 324 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 OSER1Q9NX31 292 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 MAPK8IP1Q9UQF2 711 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 SCML2Q9UQR0 700 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 INVSQ9Y283 1065 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 SH3BP1Q9Y3L3 701 aa9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 CNOT1A5YKK6 2376 aaKnown RBP9.78□□□□□ -0.84
CTNNA1-221ENST00000520339 DMXL1Q9Y485 3027 aa9.77□□□□□ -0.84
CTNNA1-221ENST00000520339 NUP210Q8TEM1 1887 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 ADAM23O75077 832 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 CILPO75339 1184 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 TULP3O75386 442 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 ZNF202O95125 648 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 KLF8O95600 359 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 CAVIN2O95810 425 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 BCKDHBP21953 392 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 RPL13P26373 211 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 ADORA2BP29275 332 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 GTF2H1P32780 548 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 PSMC2P35998 433 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 ADAM9Q13443 819 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 EOGTQ5NDL2 527 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 PMS2CLQ68D20 193 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 IL31Q6EBC2 164 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 TCEAL6Q6IPX3 200 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 CLEC20AQ6ZU45 233 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 FAM186BQ8IYM0 893 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 NAT16Q8N8M0 369 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 MDGA1Q8NFP4 955 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 TCEAL3Q969E4 200 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 PMEPA1Q969W9 287 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 CYFIP2Q96F07 1278 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 CNTNAP3BQ96NU0 1288 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 NT5C1AQ9BXI3 368 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 CNTNAP3Q9BZ76 1288 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 IRX2Q9BZI1 471 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 TPSD1Q9BZJ3 242 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 SCAND2PQ9GZW5 306 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 NMUR1Q9HB89 426 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 TMEM8AQ9HCN3 771 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 PNPLA8Q9NP80 782 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 TLR8Q9NR97 1041 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 SPHK2Q9NRA0 654 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 MARK1Q9P0L2 795 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 GMPR2Q9P2T1 348 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 HCN2Q9UL51 889 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 ACACBO00763 2458 aa9.77□□□□□ -0.85
CTNNA1-221ENST00000520339 TBC1D3BA6NDS4 549 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 TRIM24O15164 1050 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 ALDH1A2O94788 518 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 RARAP10276 462 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 IRF1P10914 325 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 KRT13P13646 458 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 ACO1P21399 889 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 GBP1P32455 592 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 ATP5C1P36542 298 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 P2RY2P41231 377 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 KIF11P52732 1056 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 CREB5Q02930 508 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 KDSRQ06136 332 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 BTBD8Q5XKL5 378 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 KLHDC10Q6PID8 442 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 SCD5Q86SK9 330 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 SEMA4DQ92854 862 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 GTPBP3Q969Y2 492 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 ABHD17AQ96GS6 310 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 FAXDC2Q96IV6 333 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 LSM14BQ9BX40 385 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 DUSP16Q9BY84 665 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 NACA2Q9H009 215 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 NPHS2Q9NP85 383 aa9.76□□□□□ -0.85
CTNNA1-221ENST00000520339 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms